Pairwise Alignments

Query, 265 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 276 a.a., polyamine ABC transporter permease from Pseudomonas aeruginosa PA14

 Score =  125 bits (313), Expect = 1e-33
 Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 2/237 (0%)

Query: 4   WLNSL--MAGLIGLVLAAPILVVAGVSLNAKRSLDFPPKGLSLAWYAEVFTDPGWRGALV 61
           W  SL  + GL+ L L  P+LV+  +S N+   L +P +G SL WYA+ F    W  +L 
Sbjct: 13  WFYSLRILCGLVLLFLVLPVLVIVPLSFNSGTFLVYPLQGFSLRWYADFFQSAEWMRSLT 72

Query: 62  ASLVVAASSAALAVAIAFPLAWFIWRWRAPWARAFEVLGMAPFILPPVITALGFLSFWST 121
            S++VA ++  LA+      A  + R           L ++P ++P VI  +    F++ 
Sbjct: 73  NSMIVAPAATLLAMVFGTLAAIGLTRGEFRGKALVMSLMISPMVVPVVIIGVASYLFFAP 132

Query: 122 FGQYGEPWTVVVSHAVFFVTLPLVTLSLGFGAVDRSFVEAASTMGADDRTVLRTVVMPLV 181
            G      +++V HAV  V   ++T+S      + + V AA+++GA   T    V +PL+
Sbjct: 133 LGLGNSYLSLIVVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGAPPLTTFFRVTLPLI 192

Query: 182 RPYMISGFAFAFVLSLNEYIVAYMVAGFTLETLPIKIFNALRYGYTPTMAAVTVLFV 238
            P +ISG  FAF  S +E +V   +AG    TLP ++F+ +R   +PT+AA   L +
Sbjct: 193 APGVISGALFAFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLI 249