Pairwise Alignments

Query, 265 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 265 a.a., putative spermidine/putrescine transport system permease protein from Paraburkholderia graminis OAS925

 Score =  112 bits (280), Expect = 8e-30
 Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 10/257 (3%)

Query: 11  GLIGLV--------LAAPILVVAGVSLNAKRSLDFPPKGLSLAWYAEVFTDPGWRGALVA 62
           G++GLV        + AP++VV  V+   K  +  P  G SL W+  +  +     A   
Sbjct: 5   GILGLVYNAFFLTFILAPLVVVMLVAFTDKGFISMPFDGASLRWFRAIIENGDIVSAFWL 64

Query: 63  SLVVAASSAALAVAIAFPLAWFIWRWRAPWARAFEVLGMAPFILPPVITALGFLSFWSTF 122
           S+ +A ++A + V +A P A  I R+R P   A     ++P ++P V+  + FL F S  
Sbjct: 65  SVRLAFAAATIGVLLAVPAALAIARYRFPGRAALTSFFLSPMMIPAVVLGIAFLRFLSLL 124

Query: 123 GQYGEPWTVVVSHAVFFVTLPL-VTLSLGFGAVDRSFVEAASTMGADDRTVLRTVVMPLV 181
              G  W++V +H V  +   L + LS   G +DR    AA + GA   T  R VV+P++
Sbjct: 125 HLSGSFWSLVCAHVVIVLPYALRLALSSAVG-LDRDAQRAALSCGASRFTAFRRVVLPMI 183

Query: 182 RPYMISGFAFAFVLSLNEYIVAYMVAGFTLETLPIKIFNALRYGYTPTMAAVTVLFVLLT 241
           R  +  G+  +F+ S +E  +   VA     TLP+ ++N +     P +A+V+ + ++ T
Sbjct: 184 RTGVAGGWVLSFIQSFDELTMTIFVATPGTTTLPVAMYNQIAQTIDPLVASVSAVLIVGT 243

Query: 242 ATIFGLIARFGDLPRLL 258
             +  L+ R   L R+L
Sbjct: 244 VLLMVLLDRMVGLDRIL 260