Pairwise Alignments

Query, 534 a.a., Sodium, potassium, lithium and rubidium/H(+) antiporter from Azospirillum sp. SherDot2

Subject, 560 a.a., sodium:proton antiporter from Herbaspirillum seropedicae SmR1

 Score =  202 bits (515), Expect = 2e-56
 Identities = 172/546 (31%), Positives = 273/546 (50%), Gaps = 43/546 (7%)

Query: 9   LVLGLMAAIIVLELAAKRLRMPPSAVLVLGGIALALIPGLP----EITPDPDLTLLLFLP 64
           L+L +  + +V  LA  +L +P      L  IAL  +  LP     I+ DP+L LLLF+P
Sbjct: 10  LLLAVAVSGVVARLAPFKLPLP------LFQIALGAVLALPMFGLRISFDPELFLLLFIP 63

Query: 65  PLLFASAYFTVWSDFRANLRIILQLAVGAVAFTTLAVGVAAHLVMPSLPWAACFTLGAIL 124
           PLLF   +     +F    R IL LA+G V FT + VG   H ++P +   + F L A+L
Sbjct: 64  PLLFTDGWRMPKREFFRLARPILALALGLVMFTVVGVGYFIHWMIPVISLPSAFALAAVL 123

Query: 125 SPPDAVAAKAALKGLPLPPRIVTLLEGESLVNDATGLVLFRIAIAAGMTGTFEAGHASLE 184
           SP DAVA  + +    LP  +  +LEGE+L+NDA+GLV F+ AIAA +TGTF    AS+ 
Sbjct: 124 SPTDAVAVSSIVGKGRLPASMQHVLEGEALMNDASGLVAFKFAIAAVITGTFSLLDASIS 183

Query: 185 FLWLAIGGVAAGVV----FGHIAALLLGRLRDVP-LSIVGGFLAAWGSYLGGEALEVSGV 239
           F+ +A GGVA G++    FG I   ++    D P + +V   L  + +Y+  E   +SG+
Sbjct: 184 FVLIAAGGVAVGLIVAWGFGLIRRKIIEWAGDEPGIQVVLLLLIPFTAYIFAEHFGLSGI 243

Query: 240 LATVGCGLVMGRRQ-HDLFTAQLRTHANAVWAVAVFLMESMVFIIIGLSLRGV--LGRLE 296
           L  V  G++M   +     +A  R    ++  +  F+   M F+++GL L G+  L  ++
Sbjct: 244 LGAVAAGMLMPYLETAGGESAATRLQGRSIMTMLEFVFNGMSFLLLGLQLPGIVSLAHMD 303

Query: 297 AAGTG---LTDLLPMIVAVTLAMILSRFAWLFPSTYLPRFLFPSLR---RRDPYPSVAVP 350
           A   G   +  L   IVA+TLA+++ RF W++ +  + RF   +LR    R+    + + 
Sbjct: 304 AKMAGNVPVWHLFVYIVAITLALVVLRFVWVWINLRMRRFA-SALRGQSGRNRKFDLRLI 362

Query: 351 VIMGWAAIRGVVSLAVALSVPV------EFPGRDIILATTWAVILVSILGQATTLAPLIR 404
            I   + +RG ++LA  +S+P+       FP RD+++     VI+ S+L  +  L  +++
Sbjct: 363 SITALSGVRGAITLAGVMSIPLLLKEHTPFPARDLLIFLATGVIVCSLLLGSLLLPWMLK 422

Query: 405 RMRLGGFTLERRPTLSESEARIRMARAA---LDAVRERSGTADGRQRHPRLLEQYG---- 457
            ++L      RR    E  AR+R++ AA   ++  +ER G          L E  G    
Sbjct: 423 DLQLDAEVKRRR--AEEMMARLRLSEAAVRSIETAQERIGMNLDENDLALLTEVSGSLLA 480

Query: 458 -HRATMAERFFESEGMLTEDRREHFAAV--LAANRAARTEILGLHRGGRIHDTVLHRLEA 514
            +R  M       E     +R + F     L A RA R E+  L    RI+D     L  
Sbjct: 481 TYRMRMNAESDSEETQRAANRFKQFERELRLEAIRAERLEVHYLRAEQRINDETFLMLIN 540

Query: 515 ELDLEE 520
           ++D+ E
Sbjct: 541 QIDMAE 546