Pairwise Alignments

Query, 504 a.a., Ribose import ATP-binding protein RbsA from Azospirillum sp. SherDot2

Subject, 510 a.a., D-allose transporter ATP-binding protein from Klebsiella michiganensis M5al

 Score =  351 bits (901), Expect = e-101
 Identities = 202/503 (40%), Positives = 307/503 (61%), Gaps = 16/503 (3%)

Query: 4   HVAFDGITKEFGPVRVLHGVSFDLHPGRVHGLLGENGAGKSTLMKILAGYHAPTFGTLSI 63
           +++  GI K FGPV  L  V   ++P  +H LLGENGAGKSTLMK+L+G H PT GT++I
Sbjct: 5   YISMAGIGKSFGPVHALKSVDLTIYPHEIHALLGENGAGKSTLMKVLSGIHEPTKGTITI 64

Query: 64  DGEAVTFRNSRDAEQRGIVLIHQELSLADDLTVAQNMFLGHEIKRGW----LLDDRKMRE 119
           +       + + A Q GI +I+QELS+ D+LTV +N+++G  + +      ++D R+MR 
Sbjct: 65  NNVNYDKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNVIDWREMRV 124

Query: 120 QAANALRQVGFDRDPDTKVRDLIVAEKQLVEIAKAQLRNARLLIMDEPTASLTPSECDRL 179
           +AA  L +VG   D D KV +L ++ KQ++EIAK  + +A++LIMDEPT+SLT  E D L
Sbjct: 125 RAAMMLLRVGLKIDLDEKVVNLSISHKQMLEIAKTLMLDAKVLIMDEPTSSLTNKEVDYL 184

Query: 180 FGLIDRLRRDGVTIVYISHKLDEVERITDEVIVMRDGRFVARAPTAETPRQRMATLMVGR 239
           F ++++LR++G  IVYISHKL E+ RI D   VM+DG  V     +E     +  LMVGR
Sbjct: 185 FLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSEVNNDDIVRLMVGR 244

Query: 240 ELTDMF---PDKRMPALGKPLMAVRGLTV--PGWAEDVSFDLHPGEILGFAGLVGAGRTE 294
           EL + F    +     + + +  V+ +T        D+SF ++ GEILGFAGLVG+GRTE
Sbjct: 245 ELQNRFNAMKESTGNIVRETVFEVKNVTSHDKKKVRDISFSVNRGEILGFAGLVGSGRTE 304

Query: 295 LFEGILGLRPRSGGTVEIEGRPVSLRNPREAMRNGLTYLSEDRKGKGLHVTMGLRDNLTL 354
           L + + G+  RSGG + + G+ +S R+P +A++ G+ Y++E R+  G      +  N+ +
Sbjct: 305 LMDCLFGVDKRSGGEIYLNGKAISPRSPLDALKKGMGYITESRRENGFFPNFSIAQNMAV 364

Query: 355 -MTLRH----HAQPLLSPASEDRALEHAVANFGIR-GNPQGTASSLSGGNQQKLAIAKFL 408
             +L+      A  L     E +  E       ++  +     + LSGGNQQK+ I+K+L
Sbjct: 365 SQSLKRGGYKGAMGLFREGDERKTAEEQRKLLALKCHSVDQNITELSGGNQQKVLISKWL 424

Query: 409 EPDPRVFVLDEPTRGVDVGAKRDIYFLIARLAAEGRGVIVISSELIELIGLCHRVIVM-R 467
              P V + DEPTRG+DVGAK +IY ++ +LA +G+ ++++SSEL E+I +C R+ V   
Sbjct: 425 CCSPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIIAVCDRIAVFCE 484

Query: 468 GRRVTATVPADRLSEEELIAHAI 490
           GR        D LSEEE++A A+
Sbjct: 485 GRLTQILTNRDDLSEEEIMAWAL 507



 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 24/251 (9%)

Query: 250 MPALGKPLMAVRGLTVPGWAEDVSFDLHPGEILGFAGLVGAGRTELFEGILGLRPRSGGT 309
           M  +GK    V  L      + V   ++P EI    G  GAG++ L + + G+   + GT
Sbjct: 8   MAGIGKSFGPVHAL------KSVDLTIYPHEIHALLGENGAGKSTLMKVLSGIHEPTKGT 61

Query: 310 VEIEGRPVSLRNPREAMRNGLTYLSEDRKGKGLHVTMGLRDNLTLMTLRHHAQPLLSPAS 369
           + I        + + A + G+  + ++         + + D LT++   +  + L     
Sbjct: 62  ITINNVNYDKLDHKLAAQLGIGIIYQE---------LSVIDELTVLENLYIGRHLTKKVC 112

Query: 370 EDRALEHA---------VANFGIRGNPQGTASSLSGGNQQKLAIAKFLEPDPRVFVLDEP 420
               ++           +   G++ +      +LS  ++Q L IAK L  D +V ++DEP
Sbjct: 113 GVNVIDWREMRVRAAMMLLRVGLKIDLDEKVVNLSISHKQMLEIAKTLMLDAKVLIMDEP 172

Query: 421 TRGVDVGAKRDIYFLIARLAAEGRGVIVISSELIELIGLCHRVIVMRGRRVTATVPADRL 480
           T  +       ++ ++ +L  EG  ++ IS +L E+  +C R  VM+      +     +
Sbjct: 173 TSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSEV 232

Query: 481 SEEELIAHAIG 491
           + ++++   +G
Sbjct: 233 NNDDIVRLMVG 243