Pairwise Alignments

Query, 505 a.a., Long-chain-fatty-acid--CoA ligase from Azospirillum sp. SherDot2

Subject, 534 a.a., AMP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  210 bits (534), Expect = 1e-58
 Identities = 163/508 (32%), Positives = 238/508 (46%), Gaps = 24/508 (4%)

Query: 6   LLDQAAARFPGRGAVFRGTGQLHSFAELRSRALRIAAGLRAAG-RPGDRIAIATENVPEY 64
           +L ++A RFP R A+  G G+  ++ EL   A R A  L A G +PG +I+    N  E+
Sbjct: 24  ILRKSARRFPDRVALTDG-GRSVTYTELERDANRFANALVARGLKPGAKISTVCNNSIEF 82

Query: 65  VELFFAIWAAGMAATPVNAKLHPRELVQILEDSGASTVFVSPKLAAGLEQALDGSPAASC 124
           V+  F I  AG+   P+N  L P ++  IL+ +G     +   L  G  +      A   
Sbjct: 83  VKALFGIHRAGLVWVPINTMLGPDDMGYILDHAGVKVAVIDDNLH-GQPERRAALEARGI 141

Query: 125 RRIVIGGAGYAALTAGD------EWAGPINPD----PQALGWLFYTSGTTGRSKGAMLSH 174
             I I  AG AA T         E    I PD     + L  + YTSGTT R KGAM  H
Sbjct: 142 DLIAINLAGKAADTGLPVFDQLIEGLSEIEPDVAFDDRDLAMIIYTSGTTSRPKGAMHCH 201

Query: 175 RNLLAMTVAHLADVEAVDEDCSLLHAAPMSH-GSGLYMAAYVARGARQVVPASSAFEPAE 233
             +    +++  +++   +D  +    P+ H  + + + +Y+  G +  +     F+P  
Sbjct: 202 LAVTMAVMSNAIEMQLSRKD-GITGQFPLFHCAAHVLLLSYLIVGGQMAI--MRGFDPVA 258

Query: 234 FLDLCDRHPGCGAFLAPTMVQRLRLEAERGGRRPANLRSIVYGGGPMYVEELRRSLAIFG 293
            ++   R+        P M Q +     R     ++LR  +Y   PM    L R++A   
Sbjct: 259 CMEAIQRNKLTVFIGLPLMYQVILDHPRRKEFDLSSLRCCIYTMAPMPRPLLERAIAELC 318

Query: 294 PVFAQIYGQGEA-PMTIASLRRRDHASDDDAVLGSV-GFARSGVEVAVVDADGRPLPVGE 351
           P F Q  GQ E  P T  S   R  A       G+  G +    E A++D  G  LP GE
Sbjct: 319 PTFVQPSGQTEMYPATTMSQPDRQLAR-----FGNYWGESTLVNETAIMDDAGNLLPPGE 373

Query: 352 VGEIVCRGDVVMAGYWNNAKATAEALRGGWLFTGDMGSFNGQGYLTLRDRSKDVIISGGS 411
           VGEIV RG  VM GY+ + +AT  A + GW  TGD+   +  G +   DR KD+I SGG 
Sbjct: 374 VGEIVHRGPNVMLGYYKDPEATEAARKFGWHHTGDLALIDEHGEVLFLDRKKDMIKSGGE 433

Query: 412 NIYPREVEEVLLRHPDVAEVCVTGQPDPEWGEIVVAFIVAEPGREISPGGLDEHCNASIA 471
           N+   ++EE LL HP V    V G P P+WGE V  F+  +PG   +   + EHC   + 
Sbjct: 434 NVASIKIEETLLAHPSVMNAAVVGLPHPQWGEAVSGFVKLKPGASATEAEIVEHCKKHLG 493

Query: 472 RFKRPKRYLFVEDLPKNNYGKVVKRELR 499
            F+ PK    V+++P    GK+ K ELR
Sbjct: 494 GFQVPKLLRIVDEMPMTATGKLRKVELR 521