Pairwise Alignments

Query, 533 a.a., putative ABC transporter ATP-binding protein YejF from Azospirillum sp. SherDot2

Subject, 543 a.a., microcin ABC transporter ATP-binding protein from Azospirillum brasilense Sp245

 Score =  391 bits (1004), Expect = e-113
 Identities = 228/532 (42%), Positives = 332/532 (62%), Gaps = 15/532 (2%)

Query: 4   VLSLRDYTLDYLTGSRPLRVLQDISLDIAPGEVLGLVGESGSGKSTLAWAIMRHLP-KNA 62
           +L +R+  +++ +G   +  ++ +S DIA GE L LVGESGSGKS  A +I++ LP   A
Sbjct: 7   LLQVRNLHVEFRSGGGAMHAVKGVSFDIAKGETLALVGESGSGKSVTALSILQLLPYPMA 66

Query: 63  RELSGSIRLGDTDLRSLPPRELTRIRGRRIGMVFQDPSTALNPTLTVGRQVTETLVTNRG 122
           R   GSIR   T+L     + L  +RG RI M+FQ+P T+LNP  ++ RQ+ ETL  ++G
Sbjct: 67  RHPHGSIRFRGTELVGAEEKVLRDVRGDRIAMIFQEPMTSLNPLHSIERQINETLFLHKG 126

Query: 123 LTRRAAWDLALELLGHVELRDPEALMRRYPHEISGGEKQRILIATAFGCRPELIVFDEPT 182
           L+R AA    LELL  V L +PE  +  YPHE+SGG++QR++IA A    P+L++ DEPT
Sbjct: 127 LSRAAARKRTLELLRLVGLPNPEKRLNAYPHELSGGQRQRVMIAMALANEPDLLIADEPT 186

Query: 183 TALDVITGARILDLFARLRAETGVAALYISHDLALVSRVADRVAVMKKGRLVEEAPAASI 242
           TALDV   A+IL+L   L+   G+A L I+HDL +V ++ADRV VM +G +VE+A  A I
Sbjct: 187 TALDVTIQAQILELLKDLQRRFGMALLLITHDLGVVRKMADRVCVMNQGEIVEQADVADI 246

Query: 243 FARPAHEETRKLVAAVPRPENRLVHDRPGDR-VLLAAEAVSVRY-ARPRLFRPPPP--PA 298
           FARP H  TRKL+AA P+ +       P D   ++AA+ + V +  +  L R       A
Sbjct: 247 FARPQHAYTRKLLAAEPKGDPL---TPPADAPEVMAADNLKVWFPIKKGLLRRTVDHVRA 303

Query: 299 THAVGFDIRAGEILGIVGESGSGKSSIARALTGLAEFSGGIRFDGRPI--GSARDMDGAY 356
              V  ++R G  +G+VGESGSGK+++  AL  L    G IRFDG+ I    A+ + G  
Sbjct: 304 VDGVSVNVRQGHTVGVVGESGSGKTTLGLALLRLHASEGAIRFDGKDIQGWQAKKLRG-L 362

Query: 357 RRAVQIVFQHPDGSLNPRQTVGEILSRPLKLFGTGSGNPTTGNLSAEIGRLLEQVRLPAA 416
           RR +Q+VFQ P GSL+PR +VG+I+   L + G GSG        A + + LE+V L  +
Sbjct: 363 RREMQVVFQDPYGSLSPRLSVGQIIGEGLTIHGIGSG----AERDAMVAKALEEVGLDPS 418

Query: 417 YATRWPHQLSGGEKQRVAIARAFAAKPSLVICDEITAPLDVSVQASIIELLLALRAETGA 476
              R+PH+ SGG++QR+AIARA   KP  V+ DE T+ LD+SVQA I++LL  ++A    
Sbjct: 419 SRHRYPHEFSGGQRQRIAIARALVLKPKFVVLDEPTSALDMSVQAQIVDLLRDIQARNNL 478

Query: 477 AYLFITHDINLIRQIAHRIAVMRRGELVDLLPIDAVDADHVHPYTRDLMAAS 528
           AYLFI+HD+ ++R ++  + VM+ G++V+  P   +  +    YTR L+AA+
Sbjct: 479 AYLFISHDLRVVRALSSHVIVMKDGKVVEQGPTRRIFEEPREEYTRALLAAA 530



 Score =  146 bits (368), Expect = 2e-39
 Identities = 95/243 (39%), Positives = 133/243 (54%), Gaps = 16/243 (6%)

Query: 298 ATHAVGFDIRAGEILGIVGESGSGKSSIARALTGLAEFS------GGIRFDGRPIGSA-- 349
           A   V FDI  GE L +VGESGSGKS  A ++  L  +       G IRF G  +  A  
Sbjct: 26  AVKGVSFDIAKGETLALVGESGSGKSVTALSILQLLPYPMARHPHGSIRFRGTELVGAEE 85

Query: 350 ---RDMDGAYRRAVQIVFQHPDGSLNPRQTVGEILSRPLKLFGTGSGNPTTGNLSAEIGR 406
              RD+ G     + ++FQ P  SLNP  ++   ++  L L   G         + E+ R
Sbjct: 86  KVLRDVRGD---RIAMIFQEPMTSLNPLHSIERQINETLFLH-KGLSRAAARKRTLELLR 141

Query: 407 LLEQVRLPAAYATRWPHQLSGGEKQRVAIARAFAAKPSLVICDEITAPLDVSVQASIIEL 466
           L+     P      +PH+LSGG++QRV IA A A +P L+I DE T  LDV++QA I+EL
Sbjct: 142 LVGLPN-PEKRLNAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTIQAQILEL 200

Query: 467 LLALRAETGAAYLFITHDINLIRQIAHRIAVMRRGELVDLLPIDAVDADHVHPYTRDLMA 526
           L  L+   G A L ITHD+ ++R++A R+ VM +GE+V+   +  + A   H YTR L+A
Sbjct: 201 LKDLQRRFGMALLLITHDLGVVRKMADRVCVMNQGEIVEQADVADIFARPQHAYTRKLLA 260

Query: 527 ASP 529
           A P
Sbjct: 261 AEP 263