Pairwise Alignments

Query, 563 a.a., Methyl-accepting chemotaxis protein from Azospirillum sp. SherDot2

Subject, 567 a.a., HAMP domain-containing methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  270 bits (689), Expect = 1e-76
 Identities = 153/378 (40%), Positives = 250/378 (66%), Gaps = 10/378 (2%)

Query: 187 VGMMTVFGLVVAGLSALALLLGWAVARSVTRPLSRVHGVMLRLADHDLDAEVPERGRRDE 246
           +GM+ +  LV+   S +    G      ++RPL R++G + ++A   LD E+P   R DE
Sbjct: 199 LGMVVMISLVI---SMVFTFFG------ISRPLMRLNGALDKMAGGQLDVEIPGAARGDE 249

Query: 247 IGGMARTLEVFKENILRNRQMEQERRSAAVQAAAEKRAAVVD-LANRFESRVGRIVDQLG 305
           IG +A+T+ V +EN     + E E+++   + AA++R   +  LA+ FE  VGRIV+ + 
Sbjct: 250 IGDIAKTVVVIRENADHRAREEAEQKAHQDEVAAQQRKQEMQKLADAFEGAVGRIVEAVS 309

Query: 306 LSASGFQQTASHLSGAVRKAEQDCTSVASASEQASVNVQAVASAAEEMSTAIRGLSGRVV 365
            +++  + +AS ++    +AE+   +VA ASE A+ NVQ+VASA EEM+++I  +S +V 
Sbjct: 310 SASTELEASASKMAHTAEEAEKLTAAVAGASEIATSNVQSVASATEEMASSIHEISRQVQ 369

Query: 366 QAAQRSKVTAERAEQARGHLDALSTAIEQVDQVVASINAVASQTNLLALNATIEAARAGE 425
            +++ +    ++A +    ++ L+TA +++  VV  IN +A QTNLLALNATIEAARAGE
Sbjct: 370 DSSRIASSAVQQANKTNDRINQLATAAQRIGDVVDLINTIAGQTNLLALNATIEAARAGE 429

Query: 426 AGKGFAVVASEVKNLASQTHAMTEQIGQQIGTVKAASDRTVEAMRGIIGQVEQIDQSAAE 485
           AG+GFAVVA+EVK LA QT   T++I QQI  ++AA++ +V A++ I   + Q+ + ++ 
Sbjct: 430 AGRGFAVVAAEVKALAEQTAKATDEISQQISGMQAATEESVSAIKEIGTTIGQMSEISSA 489

Query: 486 MAASVEQQSAATDEISRNAQQAALGTNEVSHSVVDIQKAERDSGVAAGQVKQSADTLATD 545
           +A++VEQQ +AT EISRN QQAA GT +VS ++ D+++   ++G+++ QV  +A +L+TD
Sbjct: 490 IASAVEQQGSATQEISRNVQQAAQGTMQVSANIADVERGAAETGMSSSQVLAAARSLSTD 549

Query: 546 AALLKRELDAFLAEIRAA 563
           +A LK E+  FL+ +RAA
Sbjct: 550 SAQLKTEVARFLSSVRAA 567



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 70/284 (24%), Positives = 104/284 (36%), Gaps = 23/284 (8%)

Query: 266 QMEQERRSAAVQAAAEKRAAVVDLANRFESRVGRIVDQLGLSASGFQQTASHLSGAVRKA 325
           Q+  ER   AV A A+ +  V D  +  E+ V     QL  +      T++ +  A+   
Sbjct: 28  QLTTERSINAVNARADAQQMVAD--HGLEANVSLRRMQLAAAEIRLAATSAQVDSALTAL 85

Query: 326 EQDCTSVASASEQASVNVQAVASAAEEMSTAIRGLSGRVVQAAQRSKVTAERAEQARGHL 385
                S+      A   V  +A  A++      G        A        +A Q+    
Sbjct: 86  HDARESIDRRINNA---VAQIADGADKERLRSIGALTTQYDGAMTEVGKLAKAGQSGAAS 142

Query: 386 DALSTAIEQVDQVVASINAVASQTNLLALNATIEAARAGEAGKGFAVVASEVKNLASQTH 445
           DA      + DQ+V+  N+VA+Q   L   A   A +A +A K  A       N  +   
Sbjct: 143 DADKA---KRDQLVSQANSVATQALGLMGEAVERAEKAAKATKTQAADELFSANRINFAL 199

Query: 446 AMTEQIGQQIGTVKAASDRTVEAMRGIIGQVEQIDQSAAEMAA---SVEQQSAAT-DEIS 501
            M   I   I          V    GI   + +++ +  +MA     VE   AA  DEI 
Sbjct: 200 GMVVMISLVIS--------MVFTFFGISRPLMRLNGALDKMAGGQLDVEIPGAARGDEIG 251

Query: 502 RNAQQAALGTNEVSHSVVD--IQKAERDSGVAAGQVKQSADTLA 543
             A+   +      H   +   QKA +D  VAA Q KQ    LA
Sbjct: 252 DIAKTVVVIRENADHRAREEAEQKAHQDE-VAAQQRKQEMQKLA 294