Pairwise Alignments

Query, 473 a.a., Regulatory protein AtoC from Azospirillum sp. SherDot2

Subject, 486 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  351 bits (900), Expect = e-101
 Identities = 204/482 (42%), Positives = 292/482 (60%), Gaps = 31/482 (6%)

Query: 16  VLVVDDDEAIREMLAAVLTRDGLSVTTAADGVEAVAAFAAQRHAVVLMDVRMPRMTGLQA 75
           +L+VDD+  +R+    +L  +G  V  A+ G + +     +   +V+MDVRMP M GL A
Sbjct: 4   ILIVDDELQLRQSFQRLLAGEGHDVRAASTGEQGIKLVREELPELVIMDVRMPGMDGLTA 63

Query: 76  LAEIRKLDRSTAVILMTAYAEVGAAVQAIKDGAFDYVIKPFDIAEILLQVGRALQM-RRM 134
           L  IR++D    V++MTAY+    A++A K GAFDY++KPF+I +IL  + +A++  RRM
Sbjct: 64  LRAIREIDARLPVVIMTAYSTTETAIEATKLGAFDYILKPFEIPDILALIEQAVEAGRRM 123

Query: 135 R---DDIATLHRELSSSYRTDRILTASPRMSELLQTIAKVAKSNATVLVTGESGTGKELV 191
           R   D +A            + ++  S  M ++ + I + A ++A VLV GESGTGKELV
Sbjct: 124 RARVDMVADGDDGTGQETLGEALVGTSRAMHQVYKAIGRAAPTDALVLVRGESGTGKELV 183

Query: 192 AAAIHYNSPRNAGPFVKVNCAAVPEGLLESEFFGHERGAFTGAQARRRGRFEQAEHGTLF 251
           A A++ +S R   PF+ +NC A+P+ LLESE FG+E+GAFTGA  RR G+ EQA  GT+F
Sbjct: 184 ARAVYQHSLRGEKPFLIINCVAIPDTLLESELFGYEKGAFTGATNRRVGKIEQANGGTVF 243

Query: 252 LDEIGDISPSLQVKLLRVLQEREFERVGGAELVRTDVRVIVATNRNLEEMVRQGLFRQDL 311
           LDEIGD+   +Q KLLR+LQE++ ER+GG + +  DVR+I ATN +LE  V  G FR+DL
Sbjct: 244 LDEIGDMPLGIQAKLLRLLQEKQIERLGGRQPIPVDVRIIAATNTDLEAAVADGRFREDL 303

Query: 312 YFRLNVVTLRTVPLRERPEDVRLLASHFLQRFAAENRIDVSGIDEQAMERLLAYRWPGNI 371
           Y+RL VVTL   PLRER ED+  LA +FL RF+ E  +   GI  +A+  L A  WPGN+
Sbjct: 304 YYRLKVVTLWLPPLRERSEDIPPLARYFLARFSREMDMPNPGITPEALAYLEAQPWPGNV 363

Query: 372 RELSNAMERAVVMSTGAMIVTEDLPEQIAG----RAGDSEPATD---------------- 411
           REL N++ +A+V S G  +   DL + +      R G   PA D                
Sbjct: 364 RELGNSVHKALVFSRGGPLGEPDLKQALEASRGVRPGSEGPACDLSLAADQTMQELIRRT 423

Query: 412 -TDSDGAAAPSAAGSLREQVSRFEARVVADALARNDGNRMKTAQQLGISRRSLLYKLQEY 470
            ++SDG    +   SL + V R    VV +AL    GNR + A+ LG+SR +LL K+++Y
Sbjct: 424 LSESDG---DNVFDSLMDHVGRL---VVREALHLTGGNRTRAARLLGLSRPTLLAKIEKY 477

Query: 471 GI 472
           G+
Sbjct: 478 GL 479