Pairwise Alignments

Query, 473 a.a., Regulatory protein AtoC from Azospirillum sp. SherDot2

Subject, 452 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  332 bits (852), Expect = 1e-95
 Identities = 195/458 (42%), Positives = 278/458 (60%), Gaps = 12/458 (2%)

Query: 15  AVLVVDDDEAIREMLAAVLTRDGLSVTTAADGVEAVAAFAAQRHAVVLMDVRMPRMTGLQ 74
           +VL+V+D+ ++   +   L++ G  V TA D  +A      +   +V+ D+R+P M G++
Sbjct: 5   SVLLVEDELSMLLGMQHALSQAGYEVATAGDAEKAQQLLRQRPFDLVITDLRLPGMNGME 64

Query: 75  ALAEIRKLDRSTAVILMTAYAEVGAAVQAIKDGAFDYVIKPFDIAEILLQVGRALQMRRM 134
            L  I +L   T VIL+TA+ EV  AVQAIK GAFD++ KPF    +L+ V R  +   +
Sbjct: 65  LLEGICELYPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFPRDGLLIAVERYFRFLDL 124

Query: 135 RDDIATLHRELSSSYRTDRILTASPRMSELLQTIAKVAKSNATVLVTGESGTGKELVAAA 194
           + + A L  E          +  SP M ++ + I  +A S   VLV G SG+GKELVA A
Sbjct: 125 KRENARLRGERDDG----EFIGESPMMLKVFERIRAIAGSCVPVLVLGPSGSGKELVAGA 180

Query: 195 IHYNSPRNAGPFVKVNCAAVPEGLLESEFFGHERGAFTGAQARRRGRFEQAEHGTLFLDE 254
           +H  S R   PF+K+NCAA+PE LLESE FGHE+GAFTGAQ  R+G+FE A+ GTLF DE
Sbjct: 181 LHRLSKRRDKPFIKINCAALPEHLLESELFGHEKGAFTGAQQARKGKFEAADGGTLFFDE 240

Query: 255 IGDISPSLQVKLLRVLQEREFERVGGAELVRTDVRVIVATNRNLEEMVRQGLFRQDLYFR 314
            G++  ++Q KLLRVL+++E   VGG    + DVR + AT R+LEE +  G FR+DLY+R
Sbjct: 241 AGEMPLAVQAKLLRVLEDQEVTPVGGNMPRKVDVRTVFATARDLEEAIGAGTFREDLYYR 300

Query: 315 LNVVTLRTVPLRERPEDVRLLASHFLQRFAAENRIDVSGIDEQAMERLLAYRWPGNIREL 374
           +NVV +   PLRER  DV LLA  FL+RF A++   V+   EQA   LLAY +PGN+REL
Sbjct: 301 INVVPVTLPPLRERGGDVALLAERFLRRFCAQHDRQVT-FSEQARNALLAYDYPGNVREL 359

Query: 375 SNAMERAVVMSTGAMIVTEDLPEQIAGRAGDSEPATDTDSDGAAAPSAAGSLREQVSRFE 434
            NA+ERAV++     I    LP++I         AT    +     +    L + V++FE
Sbjct: 360 RNAIERAVILCAEDKIHVGHLPKRI-------RDATQASQEQQPEETRFVQLADGVAQFE 412

Query: 435 ARVVADALARNDGNRMKTAQQLGISRRSLLYKLQEYGI 472
            + + +AL +  G R++ A+ LGI+R+ L  KL+E  I
Sbjct: 413 KKRILEALQKTGGRRIRAAELLGITRKQLWLKLKELDI 450