Pairwise Alignments

Query, 620 a.a., Signal transduction histidine-protein kinase AtoS from Azospirillum sp. SherDot2

Subject, 984 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  141 bits (355), Expect = 2e-37
 Identities = 110/373 (29%), Positives = 194/373 (52%), Gaps = 27/373 (7%)

Query: 259 IAVEVNAMARALLDAKSLTENILHSIADGVIAVDRAGQVTALNPAAEAMIGVNATEVIGR 318
           +A E++A+ R            L  +  GV ++ +  ++   N A E +  + A +V+G 
Sbjct: 623 LAAELDALRR-------YHRQTLQELPMGVCSLAKDQEILMWNRALEELTEIPALQVVGS 675

Query: 319 PYESLFKPDGRFASPLLDTLKTGRQHVGVA-LDFPGTRQTLHLTVSSSVLRDSHGEAIGA 377
              ++ +P   + S L D ++   +H+    L   G R+ L+L  ++     + G + G 
Sbjct: 676 RLSTIAEP---WRSLLSDFIEQADEHLHKQRLAHNGHRRCLNLHKAAIAEPLAPGNS-GL 731

Query: 378 VVVLKDLTEQQRLRTQIMRADRLAALGELVAGLAHEVRNPLTSIRGFMQFL-ESSDDVAE 436
           V++++DLTE Q+L  +++ ++RLA++G L AG+AHE+ NP+T I    Q L +  +D  E
Sbjct: 732 VLLVEDLTETQQLEDRLVHSERLASIGRLAAGVAHEIGNPITGIACLAQNLRDEREDDGE 791

Query: 437 WQRYAPLIVRQVDSLNRLVTELLEFGR--PRPPAFLPVQLNDLIRE-VSLLAGRKSNARI 493
               +  I+ Q   ++R+V  L+ F     R     PV L  + ++ + LL+  ++   +
Sbjct: 792 IVEISAQIIEQTKRVSRIVQSLMSFAHAGERQHQLYPVSLAQVTQDAIGLLSLNRNRTEV 851

Query: 494 AL----HPAPDLPLAEADGEALKQVMLNLIINAVQATSETGGIAIATAMAADGREAVITV 549
                 HP     +AE D + L QV++NL+ NA  A+ + G I I++ +A   +   + V
Sbjct: 852 QFINLCHPD---HVAEGDPQRLAQVLINLLSNARDASPQGGVIRISSEVAE--QTVYLVV 906

Query: 550 SDDGEGIAPENLDKVFDPFFSTKP--QGTGLGLAMAHRIVDAHHGTIAIASVPGAGTTVT 607
            D+G GI  +  D++F+PFF+TK   +GTGLGLA+ + I++ H+G I I S     T   
Sbjct: 907 EDEGSGIPKDIQDRLFEPFFTTKDPGEGTGLGLALVYSIIEEHYGQIDIDSPADPETQRG 966

Query: 608 LRIPILHNRAVDA 620
            R  I   R V+A
Sbjct: 967 TRFRITLPRHVEA 979