Pairwise Alignments
Query, 600 a.a., hypothetical protein from Azospirillum sp. SherDot2
Subject, 1772 a.a., hypothetical protein from Azospirillum brasilense Sp245
Score = 200 bits (508), Expect = 5e-55
Identities = 198/603 (32%), Positives = 256/603 (42%), Gaps = 79/603 (13%)
Query: 6 DSFTDPAAALTFR-GAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRALGQPAG 64
D+ T A L F G+A +G A + + A L P A W+NL A LG A
Sbjct: 27 DADTGRDARLLFHLGSALQGDGRLAEAVARYREALLQDPLLAGAWNNLGVALLDLGDHAA 86
Query: 65 AAQAYHHALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPGFAEAWSVAGSIL 124
A + + LRP A+ L + L R +AAA R+L + P + +A + G+
Sbjct: 87 AVRVLRTCIALRPTDAVAFNNLGTGLDGVERPEAAAGVFRRSLIIQPDYGKALNNLGN-- 144
Query: 125 LDRRAMERLPIVLRRAVRLAQDNPLPWLALAGGLGETAEPALPLACVRRAVALSPDRPAG 184
RR V RRA E AE A RRA+ + PD P
Sbjct: 145 -SRR-------VARRA-------------------EAAE-----ALYRRALIVQPDYPDS 172
Query: 185 YVNHAGLLIRLGRLDAAQALHGRLRRLAPLEGHAEAGDSLVATLRGDFATALSLARRSLS 244
Y N +L A LH R RLAP A L + G A + RR+LS
Sbjct: 173 YTNLGNVLKDWDDWQGALRLHRRAVRLAPRSAIARTTLGLALNVLGRNEEAEAAHRRALS 232
Query: 245 LQPASPAALINLSLAEHGSGMTEPARLGNERALALQPESDVARFNLSMVLLAEGDFAKGW 304
+ P A NL + + S A RAL + P AR N ++V LA G+ ++GW
Sbjct: 233 IDPGHAEAYANLGMLQWQSTRVAEAERTLRRALRIDPTLAAARLNFALVSLASGNLSEGW 292
Query: 305 RLYESRWRMERVAYPAH---APRWTGGNPAGRSLLLVAEQGQGDTLQFVRYAPMLA---A 358
Y+ R+R + +P AP W R LL+ EQG GD + F P LA A
Sbjct: 293 EAYQDRFRAK--GHPERTIGAPLWRDDAATVRRLLVWREQGVGDEMMFASCYPALADRVA 350
Query: 359 LG--AHVHLMVQPALVRLLSGLPGIASVRSLTEPP--------PACDACIPLLSLPLVFG 408
G V L P LV L S A+VR P P DA I +LP +
Sbjct: 351 AGRIGQVVLECDPRLVSLFSRSFPWATVRGEAAAPHGTETLVSPDGDAHIAAGALPRLLR 410
Query: 409 TGLATIPASVPYLSPPGQERAAWKRRLDGSPGGEGGLKVGLVWAGSAHDEQFVAHMVDRR 468
LA+ P P+L P + A W+ RL GLK+G W M R
Sbjct: 411 PDLASFPPR-PWLVPDPERLAVWRERLAIL---GPGLKIGFAWRSQL--------MTTER 458
Query: 469 RS--LPLAALAPLAGIPGVRFYSLQKGP-----PASEARTSGLDLVDWMD--EVEDFADT 519
++ + L A PL +PGV +LQ G A+EAR G+ + W D +DF
Sbjct: 459 KAAYITLEAFEPLFAVPGVVLVNLQYGDCEAEIAAAEAR-FGVTIHRWSDLNLKDDFEGA 517
Query: 520 AALVAELDLVISVDTSVCHLAGALGRPVWMLSRHDACWRWLRNRSDSPWYPTMRLFRQDR 579
AAL A LDLVI+ S LAGALG P W + D W L PWYPTMRLF Q R
Sbjct: 518 AALTASLDLVIAPAVSTGELAGALGVPAWRIGARD--WTQL-GTGVRPWYPTMRLF-QPR 573
Query: 580 PGD 582
PG+
Sbjct: 574 PGE 576
Score = 194 bits (492), Expect = 3e-53
Identities = 179/589 (30%), Positives = 247/589 (41%), Gaps = 63/589 (10%)
Query: 6 DSFTDPAAALTFRGAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRALGQPAGA 65
DS D AL G L +G+A AA + A P A+ LA+A +A G+ A
Sbjct: 638 DSVPDHPVALHLLGILRLRQGDAGEAAVVLALAVKADPDNAAAHAALADACKAAGRHDSA 697
Query: 66 AQAYHHALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPGFAEAWSVAGSILL 125
A +A+ LRP + W +LL + A A RAL + P A + G +L
Sbjct: 698 LAAQRNAVLLRPDAAEHWLNRTALLRERGAGDEAEACARRALRIRPSLGVAHTHLGHLLA 757
Query: 126 DRRAMERLPIVLRRAVRLAQDNPLPWLALAGGLGETAEPALPLACVRRAVALSPDRPAGY 185
+R RRA+ L + L +PA +RRA +P +
Sbjct: 758 EREDRAGAERSHRRALALTPSEVDALVNLGALRLRADQPAEAERLLRRATVTAPHAAIAW 817
Query: 186 VNHAGLLIRLGRLDAAQALHGRLRRLAPLEGHAEAGDSLVATLRGDFATALSLARRSLSL 245
+ L RLGR++ A A H R AP A+A ++ R A A++ R ++ +
Sbjct: 818 SHRGSALDRLGRVEKAFACHSRAVGRAPEMAEAQANLAMHWARRQRPAEAIAAYREAIRI 877
Query: 246 QPASPAALINLSLAEHGSGMTEPARLGNERALALQPESDVARFNLSMVLLAEGDFAKGWR 305
PA P A +NLS++LL +G+ GW
Sbjct: 878 NPALPTA----------------------------------HYNLSLLLLEQGELRSGWA 903
Query: 306 LYESRWRMERVAYPAHAPR-----WTGGNPAGRSLLLVAEQGQGDTLQFVRYAPMLAALG 360
E WR + + R W G N A LL+ EQG GD + F P L
Sbjct: 904 --EHDWRFDTPQFRDQKRRFAVRPWRGENIASARLLVWREQGVGDEILFASCYPDLLRRA 961
Query: 361 AHVHLMVQPALVRLLS-GLPGIASVRSLTEPPPACDACIPLLSLPLVFGTGLATIPASVP 419
H+ + LV L + LPG A+VR T P D + SLP + + PA P
Sbjct: 962 GHLVVECDRRLVSLFARSLPG-ATVRPPTVEPRDVDVQVAAASLPRLLRSDWKRFPAQ-P 1019
Query: 420 YLSPPGQERAAWKRRLDGSPGGEGGLKVGLVWAGSAHDEQFVAHMVDRRRSLPLAALAPL 479
+L P W+ RL GLKVG+ W D + R + L ALAPL
Sbjct: 1020 WLVPEPGRLDRWRNRLAAL---GPGLKVGIAWRSQIMDGE------RRAAYVTLDALAPL 1070
Query: 480 AGIPGVRFYSLQKGPPASEARTS----GLDLVDW--MDEVEDFADTAALVAELDLVISVD 533
+PGV F +LQ G A+E + G+ + W ++ +DF AAL A LDLV++
Sbjct: 1071 FAVPGVVFVNLQYGDCAAEIAAAEARFGVTIHRWDDLNLKDDFEGAAALTANLDLVLTPA 1130
Query: 534 TSVCHLAGALGRPVWMLSRHDACWRWLRNRSDSPWYPTMRLFRQDRPGD 582
S LAGALG PVW D W L PW+P+MRLF Q RPG+
Sbjct: 1131 VSSGELAGALGVPVWRFGHRD--WTQL-GTGVRPWFPSMRLF-QPRPGE 1175
Score = 178 bits (452), Expect = 2e-48
Identities = 173/541 (31%), Positives = 224/541 (41%), Gaps = 36/541 (6%)
Query: 53 AEARRALGQPAGAAQAYHHALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPG 112
A A G+ A AA Y L R +P A L +S A A RAL P
Sbjct: 1215 AAAHHRDGRLAEAAPLYERVLTARADHPVALHLSGLLAHQSGDSAAGAGRIARALDALPA 1274
Query: 113 FAEAWSVAGSILLDRRAMERLPIVLRRAVRLAQDNPLPWLALAGGLGETAEPALPLACV- 171
+ A S G++L+ A+ R P +RR RLA A LG E L
Sbjct: 1275 YGAAQSSLGTVLM---ALGRAPEAVRR-FRLALALQPGAAAALTNLGNALEAVHDLRAAA 1330
Query: 172 ---RRAVALSPDRPAGYVNHAGLLIRLGRLDAAQALHGRLRRLAPLEGHAEAGDSLVATL 228
RRA P + N +L RLG L+AA+ H RLAP +
Sbjct: 1331 QAHRRATLADPTLAEAHDNWGAVLTRLGALEAAEERHRHALRLAPEREDGWLNLGVALRR 1390
Query: 229 RGDFATALSLARRSLSLQPASPAALINLSLAEHGSGMTEPARLGNERALALQPESDVARF 288
G A R+L+L PA AL NL G T A RAL ++P A F
Sbjct: 1391 AGRLDEARRTLVRALALAPAQGDALANLGRLLRDRGETAAAERWCRRALRVEPGHPAAAF 1450
Query: 289 NLSMVLLAEGDFAKGWRLYESRWRMERVAYPAHA---PRWTGGNPAGRSLLLVAEQGQGD 345
NL ++ LA G GW Y++R+R ++ A A P W G +PAG LL+ AEQG GD
Sbjct: 1451 NLGLLDLARGRLEAGWAGYDARFRARELSGAARAVAVPAWEGEDPAGLRLLVWAEQGIGD 1510
Query: 346 TLQFVRYAPMLAALGAHVHLMVQPALVRLLSGLPGIASVRSLTEPPPA----CDACIPLL 401
+ F L A A V + LV L + A R P A D + +
Sbjct: 1511 EILFAGCLDDLIARAAAVVVECDRRLVPLFARSFPRAEWRPAPADPEAPCAGIDRHVAMG 1570
Query: 402 SLPLVFGTGLATIPASVPYLSPPGQERAAWKRRLDGSPGGEGGLKVGLVWAGSAHDEQFV 461
SLP P+ +L+ + A W+ R+D GLKVG+ W
Sbjct: 1571 SLPRWLRPRFDRFPSRPSFLTADPERAAQWRERVDAL---GSGLKVGIAWRSGL------ 1621
Query: 462 AHMVDRRRS--LPLAALAPLAGIPGVRFYSLQKGPPASE----ARTSGLDLVDW--MDEV 513
M RR PL A P+ +PG F +LQ G A+E R G+ + W +D
Sbjct: 1622 --MTAERRGAYAPLDAWGPVFAVPGAIFVTLQYGDCAAEIAEAERRFGVTIHRWGDLDLK 1679
Query: 514 EDFADTAALVAELDLVISVDTSVCHLAGALGRPVWMLSRHDACWRWLRNRSDSPWYPTMR 573
+D AAL+ LDLVI+ +SV LAG LG PVW W L PW+PTM
Sbjct: 1680 DDLDGVAALMTALDLVITPASSVGELAGGLGVPVWRFGL-QGDWTAL-GTGARPWFPTMA 1737
Query: 574 L 574
L
Sbjct: 1738 L 1738
Score = 64.3 bits (155), Expect = 4e-14
Identities = 66/209 (31%), Positives = 79/209 (37%), Gaps = 34/209 (16%)
Query: 12 AAALTFRGAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRALGQPAGAAQAYHH 71
AAALT G A A + AA A L P A N LG A + + H
Sbjct: 1310 AAALTNLGNALEAVHDLRAAAQAHRRATLADPTLAEAHDNWGAVLTRLGALEAAEERHRH 1369
Query: 72 ALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPGFAEAWSVAGSILLDRRAME 131
ALRL P W L L ++ R A R VRALAL P +A + G +L DR
Sbjct: 1370 ALRLAPEREDGWLNLGVALRRAGRLDEARRTLVRALALAPAQGDALANLGRLLRDR---- 1425
Query: 132 RLPIVLRRAVRLAQDNPLPWLALAGGLGETAEPALPLACVRRAVALSPDRPAGYVNHAGL 191
GETA A C RRA+ + P PA N L
Sbjct: 1426 ---------------------------GETA--AAERWC-RRALRVEPGHPAAAFNLGLL 1455
Query: 192 LIRLGRLDAAQALHGRLRRLAPLEGHAEA 220
+ GRL+A A + R L G A A
Sbjct: 1456 DLARGRLEAGWAGYDARFRARELSGAARA 1484