Pairwise Alignments

Query, 600 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 451 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score =  163 bits (413), Expect = 1e-44
 Identities = 147/444 (33%), Positives = 209/444 (47%), Gaps = 34/444 (7%)

Query: 168 LACVRRAVALSPDRPAGYVNHAGLLIRLGRLDAAQALHGRLRRLAPLEGHAEAGDSLVAT 227
           L  +  A    PD P         L   G+ + A A +  +    P    + A  + V  
Sbjct: 20  LQLIELAAWQEPDNPQILCRWGDWLAAAGQPEEAIAAYQAVLEFQPGCPQSIAAWAAVLN 79

Query: 228 LRGDFATALSLARRSLSLQPASPAALINLSLAEHGSGMTEPARLGNERALALQPESDVAR 287
            +G FA A++L  ++ S Q A        ++A    G    A    + AL L P +  ++
Sbjct: 80  EQGQFAEAIALLDQA-SEQTAD--LWHQRAVALQSLGDWPQALTSCDSALQLDPTAAESQ 136

Query: 288 FNLSMVLLAEGDFAKGWRLYESR---WRMERVAYPAHA-PRWTGGNPAGRSLLLVAEQGQ 343
           F  S + L  GD+++GW  YESR   +   R   P+   P W G +   ++LL+  EQG 
Sbjct: 137 FLRSKLRLGLGDWSQGWPEYESRLLVFSELRDRLPSFGCPLWQGEDLTNKTLLIWGEQGY 196

Query: 344 GDTLQFVRYAPMLAALGAHVHLM--VQPALVRLLSGLPGIASVRSLT----EPPPACDAC 397
           GD +QFVRY  +L        L+  V   LV L   L  IA+++  T    E   A D  
Sbjct: 197 GDQIQFVRYLSVLHDRWPETPLLLLVSEPLVDLFRQL-AIANLQVATQFTFETESAYDFH 255

Query: 398 IPLLSLPLVFGTGLATIPASVPYLSPPGQERAAWKRRLDGSPGGEGGLKVGLVW-AGSAH 456
           +PLLSLP   G     IP +  YL    Q       RL  +P     L+VG VW AG   
Sbjct: 256 LPLLSLPERLGATADVIPLAQGYLPRSLQSEI----RLQANPRQ---LQVGFVWQAGETS 308

Query: 457 DEQFVAHMVDRRRSLPLAALAPLA-GIPGVRFYSLQKGPPASEARTSGLDLVDWMD---- 511
           D ++      +  S+PL     L   +   +F+SLQ GP    AR S L   DW D    
Sbjct: 309 DRRYQWRQASK--SVPLEQFLQLRLQVNHCQFWSLQVGP----ARQSLLQNWDWADCDLA 362

Query: 512 -EVEDFADTAALVAELDLVISVDTSVCHLAGALGRPVWMLSRHDACWRWLRNRSDSPWYP 570
             +  FADTAA++ ++DL+I+VDT++ HLAGAL  P W+L    A WRW    S++PWY 
Sbjct: 363 DRMHSFADTAAVLNQMDLLITVDTAIAHLAGALEIPTWLLLPKFADWRWSLTGSETPWYQ 422

Query: 571 TMRLFRQDRPGDWPPVILRVRTAL 594
           +MRL+RQ   GDW  V  +++  L
Sbjct: 423 SMRLYRQAIAGDWRSVFEQLQQDL 446



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 21/69 (30%), Positives = 29/69 (42%)

Query: 31 AASLFTTAALLAPHRASIWHNLAEARRALGQPAGAAQAYHHALRLRPAYPKAWAGLASLL 90
          A  L   AA   P    I     +   A GQP  A  AY   L  +P  P++ A  A++L
Sbjct: 19 ALQLIELAAWQEPDNPQILCRWGDWLAAAGQPEEAIAAYQAVLEFQPGCPQSIAAWAAVL 78

Query: 91 LKSRRFKAA 99
           +  +F  A
Sbjct: 79 NEQGQFAEA 87