Pairwise Alignments

Query, 600 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 541 a.a., TPR domain protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  221 bits (563), Expect = 6e-62
 Identities = 168/464 (36%), Positives = 224/464 (48%), Gaps = 18/464 (3%)

Query: 136 VLRRAVRLAQDNPLPWLALAGGLGETAEPALPLACVRRAVALSPDRPAGYVNHAGLLIRL 195
           + RRA+    D+PL    L   L          A     +   P R A   N A L    
Sbjct: 76  LFRRAMARCGDDPLMLHNLGVALRGAGLIDAAAAAWEGVLRGCPQRFATLFNLARLRDDQ 135

Query: 196 GRLDAAQALHGRLRRLAPLEGHAEAGDSLVATLRGDFATALSLARRSLSLQPASPAALIN 255
           GR + A AL+ R     P    A      +   RG  A A  +  ++ S+ P       N
Sbjct: 136 GRGEEALALYRRACLADPAASDAAYNLGNLLARRGALAQAAEVLGKAASVTPHDARIQTN 195

Query: 256 LSLAEHGSGMTEPARLGNERALALQPESDVARFNLSMVLLAEGDFAKGWRLYESRWRMER 315
           L +     G    A     RA+AL P+   A++NL+ +LLA  D+ +G+  YE  WR  R
Sbjct: 196 LGIVLRRLGDAAGALACQRRAVALDPDLADAQWNLANLLLALDDYDEGFARYE--WRKRR 253

Query: 316 VAYPAHAP---RWTGGNPAGRSLLLVAEQGQGDTLQFVRYAPMLAALGAHVHLMVQPALV 372
             +    P    W G + AGR LL+  EQG GD +Q  R+ P+LA  GA V +    AL 
Sbjct: 254 APWRLVDPPLAEWRGEDLAGRRLLVGLEQGAGDMIQAARFLPVLAGRGARVIVEAPDALA 313

Query: 373 RLLSGLPGIASVRSLTEPPPACDAC-IPLLSLPLVFGTGLATIPASV-PYLSPPGQERAA 430
            LL+ + G+ SV +      A   C I   SLP   G   A + A+  PYL  P   R  
Sbjct: 314 GLLATVDGVESVVAPGAWAAARATCHIRAFSLPYRLGLRFADLAATAGPYLRVP--PRTP 371

Query: 431 WKRRLDGSPGGEGGLKVGLVWAGSAHDEQFVAHMVDRRRSLPLAALAPLAGIPGVRFYSL 490
               L   PGG+G   VGL W+G+     F  + V   R+ PLAA APL  + G+ F+SL
Sbjct: 372 TPPALP--PGGQGPC-VGLCWSGNP---DFTENAV---RAAPLAAFAPLTAVEGLTFFSL 422

Query: 491 QKGPPASEARTSGLDLVDWMDEVEDFADTAALVAELDLVISVDTSVCHLAGALGRPVWML 550
           QKGP  +E   SGL ++D    + D+A TAA +A LD+V++ DTSV HLAGALGRP  +L
Sbjct: 423 QKGPAVAELAASGLPVIDLDPWLVDYAATAAAMARLDMVVTTDTSVAHLAGALGRPCLLL 482

Query: 551 SRHDACWRWLRNRSDSPWYPTMRLFRQDRPGDWPPVILRVRTAL 594
                 WRW   R  SPWYP++RL RQ+R GDW   + R    L
Sbjct: 483 LAAHCDWRWGIGRETSPWYPSLRLLRQERLGDWRAPVARAAALL 526



 Score = 66.2 bits (160), Expect = 3e-15
 Identities = 64/199 (32%), Positives = 81/199 (40%)

Query: 15  LTFRGAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRALGQPAGAAQAYHHALR 74
           L   GA   AEG +  AA LF  A         + HNL  A R  G    AA A+   LR
Sbjct: 57  LAVLGAFEQAEGRSAAAAGLFRRAMARCGDDPLMLHNLGVALRGAGLIDAAAAAWEGVLR 116

Query: 75  LRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPGFAEAWSVAGSILLDRRAMERLP 134
             P        LA L     R + A     RA   DP  ++A    G++L  R A+ +  
Sbjct: 117 GCPQRFATLFNLARLRDDQGRGEEALALYRRACLADPAASDAAYNLGNLLARRGALAQAA 176

Query: 135 IVLRRAVRLAQDNPLPWLALAGGLGETAEPALPLACVRRAVALSPDRPAGYVNHAGLLIR 194
            VL +A  +   +      L   L    + A  LAC RRAVAL PD      N A LL+ 
Sbjct: 177 EVLGKAASVTPHDARIQTNLGIVLRRLGDAAGALACQRRAVALDPDLADAQWNLANLLLA 236

Query: 195 LGRLDAAQALHGRLRRLAP 213
           L   D   A +   +R AP
Sbjct: 237 LDDYDEGFARYEWRKRRAP 255



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 23/78 (29%), Positives = 35/78 (44%)

Query: 230 GDFATALSLARRSLSLQPASPAALINLSLAEHGSGMTEPARLGNERALALQPESDVARFN 289
           G  A A  L RR+++     P  L NL +A  G+G+ + A    E  L   P+     FN
Sbjct: 68  GRSAAAAGLFRRAMARCGDDPLMLHNLGVALRGAGLIDAAAAAWEGVLRGCPQRFATLFN 127

Query: 290 LSMVLLAEGDFAKGWRLY 307
           L+ +   +G   +   LY
Sbjct: 128 LARLRDDQGRGEEALALY 145