Pairwise Alignments

Query, 600 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 520 a.a., Tetratricopeptide (TPR) repeat from Paraburkholderia bryophila 376MFSha3.1

 Score =  226 bits (575), Expect = 2e-63
 Identities = 192/563 (34%), Positives = 256/563 (45%), Gaps = 61/563 (10%)

Query: 48  IWHNLAEARRAL--GQPAGAAQAYHHALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVR 105
           I H LA A++ L  GQ   AA   H  L   P + +A +GL  +  +      AA   ++
Sbjct: 3   IEHALAAAQKNLMAGQLDDAASLLHGILASVPDHSEALSGLGYIAAEQGDHARAAEFLIQ 62

Query: 106 ALA-LDPGFAEAWSVAGSILLDRRAMERLPIVLRRAVRLAQDNPLPWLALAGGLGETAEP 164
           A A +   F +                     L  A R+ Q            L +  + 
Sbjct: 63  ASAHMSVSFEQ---------------------LNFAARVCQ------------LAQRHDD 89

Query: 165 ALPLACVRRAVALSPDRPAGYVNHAGLLIRLGRLDAAQALHGRLRRLAP--LEGHAEAGD 222
           A+ L    R +A  PD  A     A  LI+LG L  A  +   L ++ P   E H   G 
Sbjct: 90  AIAL--FERCLARFPDHAASLHGVAMELIQLGELQRALEILVHLCKIQPQSAEAHYNRGS 147

Query: 223 SLVATLRGDFATALSLARRSLSLQPASPAALINLSLAEHGSGMTEPARLGNERALALQPE 282
            L    R  +   L   R++++L+P    A +NL +A       + A L  ++AL+L P 
Sbjct: 148 LLGKLER--YEDELDAYRQAIALKPRFVRAYVNLGVALRDLRRFDEALLQFKKALSLDPN 205

Query: 283 SDVARFNLSMVLLAEGDFAKGWRLYESRWRMERVAYP-AHAPRWTGGNPA-GRSLLLVAE 340
              AR N +   L  G+F  GWR YE RWR    ++    +  WTGG P   R++L+  E
Sbjct: 206 DVGARTNRAQTNLLLGEFEHGWREYEWRWRDGTGSHGFPQSTLWTGGQPIRDRTILVHHE 265

Query: 341 QGQGDTLQFVRYAPMLAALGAHVHLMVQPALVRLLSGLPGIASVRSLTEPPPACDACIPL 400
           QG GDTLQFVR+   L+A GA V L VQ AL+ LL    G A V   T   P  D  IP 
Sbjct: 266 QGFGDTLQFVRFVDRLSAAGARVVLRVQDALLPLLKNYRGAAEVIGETGEVPHFDYHIPT 325

Query: 401 LSLPLVFGTGLATIPASVPYLSPPGQERAAWKRRLDGSPGGEGGLKVGLVWAGSAHDEQF 460
           LSLP         +  + PY+         W      S       KVG+VW+GS      
Sbjct: 326 LSLPFALKVRAPDLAVTGPYVHADDALVRQWDDLFAASARRP---KVGIVWSGSR----- 377

Query: 461 VAHMVDRRRSLPLAALAPLAGIPGVRFYSLQKGPPASEARTSGLDLV------DWMDEVE 514
             H+ D  RS+ L  L PL       F++LQ     S+ RT    L       D   ++ 
Sbjct: 378 -THVNDHNRSISLEQLTPLFDADA-DFFALQHDVRDSD-RTCLAQLEQRALLRDVSAQLT 434

Query: 515 DFADTAALVAELDLVISVDTSVCHLAGALGRPVWMLSRHDACWRWLRNRSDSPWYPTMRL 574
            FA+TAAL+A LDLVISVDT+V HLAGALG+PVW+       WRW  +RSDSPWY    L
Sbjct: 435 TFAETAALIARLDLVISVDTAVAHLAGALGKPVWIAVPFMPDWRWQLDRSDSPWYAQAHL 494

Query: 575 FRQDRPGDWPPVILRVRTALERW 597
           FRQ   GDW  V+  +R  L+ W
Sbjct: 495 FRQTTRGDWTGVVAALRAELDAW 517



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 29/104 (27%), Positives = 42/104 (40%)

Query: 8   FTDPAAALTFRGAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRALGQPAGAAQ 67
           F D AA+L       +  GE   A  +      + P  A   +N       L +      
Sbjct: 101 FPDHAASLHGVAMELIQLGELQRALEILVHLCKIQPQSAEAHYNRGSLLGKLERYEDELD 160

Query: 68  AYHHALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDP 111
           AY  A+ L+P + +A+  L   L   RRF  A     +AL+LDP
Sbjct: 161 AYRQAIALKPRFVRAYVNLGVALRDLRRFDEALLQFKKALSLDP 204



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 6/196 (3%)

Query: 7   SFTDPAAALTFRGAAALAEGEAVLAASLFTTAALLAPHRASIWHNLAEARRA--LGQPAG 64
           S  D + AL+  G  A  +G+   AA     A+    H +  +  L  A R   L Q   
Sbjct: 32  SVPDHSEALSGLGYIAAEQGDHARAAEFLIQASA---HMSVSFEQLNFAARVCQLAQRHD 88

Query: 65  AAQA-YHHALRLRPAYPKAWAGLASLLLKSRRFKAAARAAVRALALDPGFAEAWSVAGSI 123
            A A +   L   P +  +  G+A  L++    + A    V    + P  AEA    GS+
Sbjct: 89  DAIALFERCLARFPDHAASLHGVAMELIQLGELQRALEILVHLCKIQPQSAEAHYNRGSL 148

Query: 124 LLDRRAMERLPIVLRRAVRLAQDNPLPWLALAGGLGETAEPALPLACVRRAVALSPDRPA 183
           L      E      R+A+ L       ++ L   L +       L   ++A++L P+   
Sbjct: 149 LGKLERYEDELDAYRQAIALKPRFVRAYVNLGVALRDLRRFDEALLQFKKALSLDPNDVG 208

Query: 184 GYVNHAGLLIRLGRLD 199
              N A   + LG  +
Sbjct: 209 ARTNRAQTNLLLGEFE 224