Pairwise Alignments

Query, 447 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 448 a.a., type VI secretion protein from Burkholderia phytofirmans PsJN

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 18/312 (5%)

Query: 11  IAWHDGMLLAPQHFQQQALRNERLLTYHAGHARPFHWGVVHFQVDRVNLVSGLVRIRELE 70
           + W +G+ L PQHFQ+Q   +E  L       +P++WGV   + DR  L S ++R+ EL 
Sbjct: 7   VLWGEGLFLRPQHFQRQDAYHEARLFESIQAIQPYNWGVRSARFDRDALGSNVLRVSELS 66

Query: 71  AIMPDGLIVHHAGDSTEPLEVDISAYADPVGQTQITIHLVIPQALADRA-----PGPGEI 125
            + PDG +  ++    + L   I+    P G  + T +L +       A        G +
Sbjct: 67  LVFPDGAL--YSAPQADDLPPPIALDTLPDGINEFTFYLALHPLRETGANYAQDSNAGFV 124

Query: 126 SRFLSVEGRPVPD-LNGGEEVAIARLRPRLGLFATTGPNQKPPQKFVSMPVAQA-TFRND 183
           SR++S E  PV D      E  I  L+  + L A    + +P  + +S+P+ +       
Sbjct: 125 SRYVS-EQTPVADHFTDAAEADITFLKTSVKLIA----HSEPRDQLLSVPLVRVRRTATS 179

Query: 184 AFVLTD-FVPPTLSVTANSALGRLGGEIVRRVREK--ALFLAERSGVGTGNAATELADAA 240
            F + D FVPP L++ A+  L +   +++  ++ K  AL+   R              A+
Sbjct: 180 GFEIDDTFVPPCLAIDASPILHQRLRQLIDALQAKVNALYGFHREPTKNIIEFRSGDIAS 239

Query: 241 RTEIRSLVTGLPPLEAQLAVGVCHPFDVYLSLCTLAGHLSAFANGAVPAKLSRYDHDDPM 300
              + +       L         HP  ++  L  LAG L  F+ G   + L  Y HDDP 
Sbjct: 240 FWLLHTASAAFASLAHLYQHSALHPERLFQELLRLAGQLMTFSKGYALSDLPAYRHDDPG 299

Query: 301 SAYGEVRDFILR 312
             +  + D ILR
Sbjct: 300 PGFARL-DTILR 310