Pairwise Alignments

Query, 489 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 491 a.a., type VI secretion protein from Pseudomonas fluorescens FW300-N2E3

 Score =  365 bits (936), Expect = e-105
 Identities = 188/475 (39%), Positives = 288/475 (60%), Gaps = 7/475 (1%)

Query: 14  SLLDRMMVEGKMAREEGQRPYARDLLSEFVDQVVAETGDAVAVDVVEAINHRIAQIDELI 73
           S+LD ++ E ++  ++     A+  +S F+++++    +   V     ++  IA+ID  +
Sbjct: 17  SILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVKKA-MVDRMIAEIDAKL 75

Query: 74  SLQLNEVLHHEDFQKLEATWRGLNYLVMNSETGKQLKIRVLNSSRKDLQKDLDSAVEFDQ 133
           S Q++E+LHH DFQ LE+ WRGL  LV  +   + +KI +LN S++DL  D + + E  Q
Sbjct: 76  SRQMDEILHHPDFQSLESAWRGLQLLVDRTNFRENIKIEILNVSKQDLLDDFEDSPEVMQ 135

Query: 134 SALFKMVYEAEYGTLGGTPYSVLIGDYEFGRHPQDISLIEKISNVAAAAHAPFIAAASPK 193
           + L+K +Y AEYG  GG P   +I +Y       D+ L++ +S+VA  +HAPFIAAA PK
Sbjct: 136 AGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSSVACMSHAPFIAAAGPK 195

Query: 194 MFDMDSFSELSGPRDLSKIFETAEMTKWRSFRASEDSRYVALVMPHTLLRLPYGPKTVPV 253
            F ++SF+ L   +DL   FE  +  KW+SFR SEDSRY+ L +P  LLR PY P+  PV
Sbjct: 196 FFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYIGLTVPRFLLRNPYDPEENPV 255

Query: 254 EGVNFVEDVDGRDHSKYLWGNASWALGARITDAFAKYGWTAAIRGVEGGGRVGGLPTHTF 313
           +   + E V    H  YLWGN ++A G ++TD+FAK+ W   I G + GG V  LP H F
Sbjct: 256 KSFVYKETV-ANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHF 314

Query: 314 KTDEGDVALKCPTEIAITDRREKELNDLGFISLVHCKNTDYAAFFGGQTANKPKVYNTN- 372
           ++  G++  K PTE+ ++DRRE EL + GFISL   K +D AAFF   +  KPK +  + 
Sbjct: 315 ES-MGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASSVQKPKFFGISA 373

Query: 373 ---EANANARLSAMLPYMLVSSRFAHYLKVMLRDKIGSFTTRGNVQSYLNTWIGNYILLD 429
               A  N +L   LPYM++ +R AHYLKV+ R+++GS+  R +++  LN WI  Y+   
Sbjct: 374 EGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLELELNKWIRQYVADQ 433

Query: 430 DDASQDMKARFPLREARVDVYEVPGRPGVYRANVFLRPHFQLEELSASIRLVAEL 484
           ++ S +++ R PLR A++ V +V G PG YR ++ +RPHF+      ++ LV +L
Sbjct: 434 ENPSAEVRGRRPLRAAQIVVSDVEGEPGWYRVSLNVRPHFKYMGADFTLSLVGKL 488