Pairwise Alignments

Query, 345 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 348 a.a., type VI secretion system hcp secretion island protein HsiH1 from Pseudomonas aeruginosa PA14

 Score =  139 bits (351), Expect = 8e-38
 Identities = 104/339 (30%), Positives = 156/339 (46%), Gaps = 22/339 (6%)

Query: 1   MATPGRQSARPL--IEALEAEPWGFDLFQAIALLERAAPDREPLGSGIDPDREAVRIEHD 58
           MA    Q + PL  +  + A PW +D FQA+  +E  +P    LG  +    + +R+   
Sbjct: 1   MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRLGHSVRLADDPLRLGQK 60

Query: 59  ATLAFPASDVVSARQDEDGRGVVRSPVL-----GLGGTGGPLPYVATEMMLERAAR-HDT 112
               F  S + S  Q     G    P L     GL G  GPLP   TE   ER    +D 
Sbjct: 61  PDCTFAPSTLASVSQ----AGTAAVPRLDQFFFGLTGPNGPLPLHLTEYARERQRNVNDA 116

Query: 113 AGAAFYDIFNHRLMSILYRTRQGSLPLLERDP-ERSLLARALRSLVGIGTGHLEERLPGA 171
               F D+F+HRL+++ YR    + P +  D  +    +  L +L G G   L  R P A
Sbjct: 117 TFKRFMDVFHHRLLTLFYRAWAEARPEISHDRIDDDYWSARLAALSGRGMPSLRGREPLA 176

Query: 172 PDRMLLAFSGILSCRVRSAAGLETMIGAIFQVEARVKGFVGRWLPLGEEATTVVSSGRRG 231
            D     ++G L+ + R   GL  ++   F+V   V+ +VG+WL L E +   V S    
Sbjct: 177 -DTARYYYTGHLAAQTRYPDGLRVILAEYFEVPVAVEEYVGQWLELPERSRLGVDS---- 231

Query: 232 RNNRLGQDMVVGRRVWDQQTCYAIELKMDSLERYRDFLPSGRHHATLCAIARFHSGDGMD 291
               LG D+ +G  VWD+Q  + + L    L++Y+ FLP G H   L A    + G+ +D
Sbjct: 232 --TSLGMDVCLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVELAAWVAEYLGEELD 289

Query: 292 FQISLVLSPPMVPHTRLSARDGSLLGWTSWLRFPNSPSR 330
           + ++LVL    VP   L  + G  LG+ +WL  P   +R
Sbjct: 290 WDVNLVLQRHEVP--PLGLQGGGRLGFNTWLGDPGQDAR 326