Pairwise Alignments

Query, 560 a.a., Alpha-hemolysin translocation ATP-binding protein HlyB from Azospirillum sp. SherDot2

Subject, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (462), Expect = 4e-50
 Identities = 132/525 (25%), Positives = 245/525 (46%), Gaps = 5/525 (0%)

Query: 23  VFAASLAANLLGLASSFYTMLVLNRYVTHGVDSTLAALTVGVVLSIAFEHLFRHVRLGIA 82
           V  ASL  NL  +A+  ++ +V ++ V +    TL  L+ G+++   F+ +F+ +R    
Sbjct: 157 VLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIFLFDFVFKMLRSYFI 216

Query: 83  GRIGRAEHDRLATGAFGILLTARSGAGSAEGDAARREAMRAPEQIDAALGSANLATLFDL 142
              G+     +++  F  ++  R  A      A  R  ++  E I     SA +++L DL
Sbjct: 217 DVAGKKSDILISSKLFSKVMGIRMEARPPSVGAFARH-LQEFESIREFFTSATISSLIDL 275

Query: 143 PFALGFILVVALVSWPLAAICVLFTLLSIAAGLLAQADMRAVGRDLAQAGADAQGLVTSA 202
           PFAL F++++ L++  L  + V+  L+ +    L Q+ ++    + ++  +     +  +
Sbjct: 276 PFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEEGSRLASQKYANLIES 335

Query: 203 IVGRDAAALFGGAKPLLGDWQRAAKTLRSLRERMSMRQGRAQSMAQSLQALQGVAVIATG 262
           + G +   LFG        W+ A   + +   +        Q+ A  +Q    + +I  G
Sbjct: 336 LAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQNTAGFVQQAANIGMIIVG 395

Query: 263 AVLVVRGELDVGSLIGVNLLVGRALAPFTRLAQIGESLAMARQAQSRLEQFARTAVEPPT 322
             L+  G+L +G LI   +L GRA+ P  +L+ +      A+ + + +EQ      E   
Sbjct: 396 VYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEE 455

Query: 323 GTSL---PRYGGTLELRDLTYTPAGAVTPLLRRLSLSVPAGNILVLKGRNGSGKSTLIRL 379
           G      P   G +EL  +T+    +    +R LSL++  G  + + GR GSGK+TL RL
Sbjct: 456 GKRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERL 515

Query: 380 IAGLADPQEGAVLADGVDIRKFAPLWWRQQTGYLPQEPVFLNRTIRENLLLANPRLSETD 439
           I GL  P EG V  D  DI +   +  R+  G +PQ+ V    +IR+N+ L  P   + +
Sbjct: 516 IMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDRE 575

Query: 440 LQAVLHRAGAERAVADCAQGLDTPLRNFGQELPVGHRRRLALARALAVGGRLILLDEPTD 499
           +    +RAG          GL+  +   G  L  G R+ +++ARA      ++L+DEPT 
Sbjct: 576 VMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTS 635

Query: 500 GLDAEGTAVVYRTLIELARAGHTVVIASHDPRILQGASLVLDLDQ 544
            +D      + + L +L +   T+++ +H   +L     V+ +++
Sbjct: 636 AMDNRSEMHIKQQLSQL-KPSETLILITHKTSMLDVVDRVIVMEK 679