Pairwise Alignments

Query, 560 a.a., Alpha-hemolysin translocation ATP-binding protein HlyB from Azospirillum sp. SherDot2

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  168 bits (426), Expect = 6e-46
 Identities = 146/550 (26%), Positives = 250/550 (45%), Gaps = 28/550 (5%)

Query: 10  LLRLRSNLRLTTRVFAASLAANLLGLASSFYTMLVLNRYVTHGVDSTLAALTVGVVLSIA 69
           +LR +S LR    VF  ++A  +  L S      V+++ +     S+L  L + ++    
Sbjct: 160 ILRQKSQLR---DVFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAMLALAI 216

Query: 70  FEHLFRHVRLGIAGRIGRAEHDRLATGAF----GILLTARSGAGSAEGDAARREAMRAPE 125
            E  + ++R  + G +    +  L+   +    G+ LT      + +  A  RE      
Sbjct: 217 AEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVREMA---- 272

Query: 126 QIDAALGSANLATLFDLPFALGFILVV----ALVSWPLAAICVLFTLLSIAAGLLAQADM 181
           QI   L  + L  L DL F   F+ V+    + ++W +    V++ +L + AG L +  +
Sbjct: 273 QIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPLIRKKV 332

Query: 182 RAVGRDLAQAGADAQGLVTSAIVGRDAAALFGGAKPLLGDWQR--AAKTLRSL-RERMSM 238
            +      ++ A+A   +T A+ G +           L  WQR  + +  RS   ++  +
Sbjct: 333 ESE----YESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGL 388

Query: 239 RQGRAQSMAQSLQALQGVAVIATGAVLVVRGELDVGSLIGVNLLVGRALAPFTRLAQIGE 298
             G+A ++ Q L A     ++  G   V++GE+  G L+  N+L G    P  RLAQI +
Sbjct: 389 IAGQAIALVQKLTA---ALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQ 445

Query: 299 SLAMARQAQSRLEQFARTAVEPPTG--TSLPRYGGTLELRDLTYTPAGAVTPLLRRLSLS 356
                  A  R+        E       S+P   G +E  ++ +        +L  LSL 
Sbjct: 446 DFQHTLIALRRVGDILDEPRENSKQGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLK 505

Query: 357 VPAGNILVLKGRNGSGKSTLIRLIAGLADPQEGAVLADGVDIRKFAPLWWRQQTGYLPQE 416
           +  G  + + G +GSGKSTL RL+  L  PQ G VL DG+D+    P+  R+    + QE
Sbjct: 506 IKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQE 565

Query: 417 PVFLNRTIRENLLLANPRLSETDLQAVLHRAGAERAVADCAQGLDTPLRNFGQELPVGHR 476
            +  + ++ +N+ L  P+ S+ +++     AGA   +     G + P+   G  L  G R
Sbjct: 566 SILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQR 625

Query: 477 RRLALARALAVGGRLILLDEPTDGLDAEGTAVVYRTLIELARAGHTVVIASHDPRILQGA 536
           +R+ALARAL V  R++LLDE T  LD    A +   + E+ R G TV+  +H    ++ A
Sbjct: 626 QRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICR-GRTVISIAHRLNTIRHA 684

Query: 537 SLVLDLDQSQ 546
             +  LD+ Q
Sbjct: 685 DNIFVLDKGQ 694