Pairwise Alignments

Query, 252 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 245 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas fluorescens FW300-N1B4

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 9/220 (4%)

Query: 18  ALLALLGLCTPARAEYWTVASEDHFPPYNYSFNGNRTGIDTEIVNALLKELNVTPVHRPL 77
           AL+ LL L   A AE   + + D +PP+  +   N  G+ T+IV+  L           +
Sbjct: 9   ALIGLLLLTQSAAAEKLRLVA-DAWPPFTDATLVNG-GLATDIVSTALARAGYASNFEQV 66

Query: 78  SWTEVVQSMDENTADI--GFQFIASPTRFAQYNMIGPFRTGTTVFMVRKDSNITFDRLED 135
            W   +  + E   D+     +    T+  Q++  G +      F+ RKD+ I F+ L+ 
Sbjct: 67  PWARALFGVGEGRYDVLVNAWYTDERTKLGQFS--GEYLLNRVRFLKRKDTPIEFNNLQQ 124

Query: 136 LTSYRIGVVDGFSYAADFDAATYLEKVASSSNVVNFRRLILGRVDVIVGDLHVLN-YMAK 194
           L ++ I VV G++Y+  FD    L+KV   S  +  R +   RV + + D  V   Y+++
Sbjct: 125 LHTFPIAVVRGYAYSQAFDDDVSLQKVPVHSFAMAVRMVAADRVKLTLEDEFVARYYLSR 184

Query: 195 QDGRLKD-VRVLPKPVGLIPRYIALPKARKEKAERLQAAF 233
           +  ++++ V  LPKP+     +I L   +  + E++ A F
Sbjct: 185 ESSKVRNAVEFLPKPLSENSLHI-LVSLKNPQHEQIVAGF 223