Pairwise Alignments

Query, 567 a.a., Putative multidrug export ATP-binding/permease protein from Azospirillum sp. SherDot2

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  241 bits (614), Expect = 9e-68
 Identities = 166/553 (30%), Positives = 274/553 (49%), Gaps = 14/553 (2%)

Query: 5   LRWAGGFVRPHRSRLAVSVVLSLAGTGIGLAQPWLTKRIVDDGLTGGDARLLVLLTLGML 64
           L W    +   +S+L    + ++A     L  P L + ++D  L G     L +L L ML
Sbjct: 153 LSWFAPSILRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAML 212

Query: 65  AAGLVSTLLSGANRLVYTRASAGVLFAMREHVYGHLQTLPPRFYARWSAGDVLGRLDGDL 124
           A  +     S     V+   ++ V   +   +Y HL  LP  ++ +   G ++ R+  ++
Sbjct: 213 ALAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVR-EM 271

Query: 125 AEVQRFAVDAPLSALNALLTLAGAVALMLLIDPALTVIAFLLLPAQALFLRNARLWVERS 184
           A++++F   + L  L  L+ +   +A+M      LT +    L    +    A   + + 
Sbjct: 272 AQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPLIRKK 331

Query: 185 ARALRDSMAALTGFFVQRLSAMKLIQSLGAESQEADRLAALDRDCLGQLLRQQMVGIVTG 244
             +  +S A  T F  + ++ ++ I++   E +  ++   +    L +    Q  G++ G
Sbjct: 332 VESEYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGLIAG 391

Query: 245 SVPGLLGSAGTAAVFLWGGLRVIDGELSLGALIAFSAYLGRATGPVQGLLGLIVGAQRAH 304
               L+     A +  WG   V+ GE++ G L+AF+   G  T PV  L  +    Q   
Sbjct: 392 QAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTL 451

Query: 305 VSLDRLSELLSESPAVNRPARTVIPACRGGALSVEGVVFGHGPGRP-VLDGLSLTIPAGS 363
           ++L R+ ++L E    ++     +P   GG +    + F +    P VL  LSL I  G 
Sbjct: 452 IALRRVGDILDEPRENSKQGLASVPELDGG-IEFSNIRFRYHQDAPEVLANLSLKIKPGQ 510

Query: 364 KVGLLGPSGAGKSTLTDLLHRHYDPERGRIALDGVDLRNLDPALLRRRVAVLGQDAPLLP 423
            +G+ GPSG+GKSTLT LL R Y P+ G++ +DG+DL   DP  LRR ++V+ Q++ L  
Sbjct: 511 FIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFS 570

Query: 424 GSIADNLRFGLTAAESAALDRDTLAEAVAAAQLSG---WIAGLPHGLDTPVGAWASALSG 480
           GS+ADN+R     A    +          AAQL+G   +I GLPHG + PVG   +ALSG
Sbjct: 571 GSVADNIRLCKPQASDEEIRH--------AAQLAGALAFIEGLPHGFNQPVGEKGAALSG 622

Query: 481 GQRQRIALARCLLRKPDLLILDEPVSALDPAAAERLSADVDRLFAGRTRLVISHRGEALA 540
           GQRQRIALAR LL  P +L+LDE  SALD  +   + +++D +  GRT + I+HR   + 
Sbjct: 623 GQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTIR 682

Query: 541 GCDAVYRLEHGRL 553
             D ++ L+ G++
Sbjct: 683 HADNIFVLDKGQV 695