Pairwise Alignments

Query, 539 a.a., Periplasmic oligopeptide-binding protein from Azospirillum sp. SherDot2

Subject, 535 a.a., ABC transporter substrate-binding protein from Escherichia coli Nissle 1917

 Score =  261 bits (667), Expect = 5e-74
 Identities = 168/516 (32%), Positives = 264/516 (51%), Gaps = 11/516 (2%)

Query: 21  AGTAAQAATVLNRGNGGEPSTLDPHRTDGRIESNILRDLFEGLVVYGPDGRILPGVAESW 80
           A T      V    N  +P TLDP + +    + I+ DLFEGLV    +G++ P  AE W
Sbjct: 25  ANTPLAPQQVFRYNNHSDPGTLDPQKVEENTAAQIVLDLFEGLVWMDGEGQVQPAQAERW 84

Query: 81  QVSEDGKLYSFQLRADARWSNGDAVTAEDFVYSLRRALTPKDGIQPSSNMRV--IKGAAA 138
           ++ + GK Y F LR+  +WS+G  +TAEDFV   +RA+ PK     +  +    I  AAA
Sbjct: 85  EILDGGKRYIFHLRSGLQWSDGQPLTAEDFVLGWQRAVDPKTASPFAGYLAQAHINNAAA 144

Query: 139 VIDGTKPADTLGVAAPNPRTVTIALEAATPYFLDLIAADNSALPVHRGTVESQRERWTDP 198
           ++ G     +LGV A + RT+ + LE   P+F  ++A   +  PV    +    + W+ P
Sbjct: 145 IVAGKADVTSLGVKATDDRTLEVTLEQPVPWFTTMLAWP-TLFPVPHHVIAKHGDSWSKP 203

Query: 199 GKMVSNGAYVLEEWRARQQIGLGRNANFHGRSGVSIDKVNFFPIDDSAEEVDRFKAGTLH 258
             MV NGA+VL++W   ++I   +N  +       + +V +  +D+S    +R++AG + 
Sbjct: 204 ENMVYNGAFVLDKWVVNEKITARKNPKYRDAQHTVLQQVEYLALDNSVTGYNRYRAGEVD 263

Query: 259 LTYEVPQDRVKWISLTEPKVFWNRPFLATYYYAFNLTVEPFKSNRDLRRALSLAVNRENI 318
           LT+ VP  ++  I  + P      P L + YY FNL   PF   R +RRAL L V+R+ I
Sbjct: 264 LTW-VPAQQIPAIEKSLPGELRIIPRLNSEYYNFNLEKPPFNDVR-VRRALYLTVDRQLI 321

Query: 319 VDKVTRAGETPAYGLVPPIVPNYRRQTADFIAEPMDNRLREARRLFSTAGFSPMQPLAVE 378
             KV     TPA  L PP V  +   T D + +PM  R+  A+ L   AG+    PL  E
Sbjct: 322 AQKVLGL-RTPATTLTPPEVKGFSATTFDELQKPMSERVAMAKVLLKQAGYDASHPLRFE 380

Query: 379 ILYNQSENNRVIADAVISMWQDAFGKGIQVKPVSVERTDYLKRRARRDFQIVRAAWIGDY 438
           + YN+ + +   A A+ S W+   G  + ++  ++E   YL  R   DF + R +W   Y
Sbjct: 381 LFYNKYDLHEKTAIALSSEWKKWLGAQVTLR--TMEWKTYLDARRAGDFMLSRQSWDATY 438

Query: 439 ADPTVFLNLMLSTALPPRNDPGYRSRKYDDLLAKAAASEDAAQRSSLLGQAEKAMIDDDP 498
            D + FLN + S +    N   +++ +YD LL +A    DA +R++L  QAE  +    P
Sbjct: 439 NDASSFLNTLKSDS--EENVGHWKNAQYDALLNQATQITDATKRNALYQQAEVIINQQAP 496

Query: 499 VIPIYHFSTKSLVSQQIKGW-VYNVRDVHPSRFLSI 533
           +IPIY+     L+   + G+ ++N +D   S+ L I
Sbjct: 497 LIPIYYQPLIKLLKPYVGGFPLHNPQDYVYSKELYI 532