Pairwise Alignments

Query, 1110 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 375 a.a., High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N1B4

 Score = 77.4 bits (189), Expect = 2e-18
 Identities = 79/314 (25%), Positives = 143/314 (45%), Gaps = 24/314 (7%)

Query: 13  SAGTVRIAYAGN----LSEGGQDIVRALGLLADGINATGGIDGLQLQFVPFDDHGVSPSA 68
           +A T++I  AG     +++ G        +  + INA GG+DG +L+ V +DD    P  
Sbjct: 26  AADTIKIGIAGPKTGPVAQYGDMQFSGSKMAIEQINAKGGVDGKKLEAVEYDD-ACDPKQ 84

Query: 69  RKAAAEIVEDDSILAVIGHDSSATSLAAAPIYAAAGIPALSPMASETSL-TRNNAWYFRI 127
             A A  V +D +  V+GH  S+++  A+ IY   G+  ++P A+   + TR     FR 
Sbjct: 85  AVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSPDITTRGYKMIFRT 144

Query: 128 GHSDEREAAFMADYVRLGLLADSVALLRTPQTVTERLAGPLRDVMPQRGVGLRLDAAINP 187
              D  +     +Y+   +    VA+L   Q   E +A  ++  + ++GV + +   IN 
Sbjct: 145 IGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIASAVKTTLEKKGVKVAVFEGINA 204

Query: 188 AAAGFARDIADFVGTLRGLSAETVVVLLATEEPAVMLIQALRDAGVTNRILGPNWLGAPS 247
                 +D +  V  L+  + + V       E  ++L Q+ ++ G+  + +GP  +G  S
Sbjct: 205 G----DKDFSSMVSKLKQANVDFVYYGGYHPELGLLLRQS-QEKGLKAKFMGPEGVGNDS 259

Query: 248 FGKQLSRLPRESSHPGLYTGKLFVISSFLPDIAN-QQANRLLAAYDARFGPLGNWAALYA 306
               +S++ +E+S   L T    +  SF  D AN   A+   A  +   GP        +
Sbjct: 260 ----ISQIAKEASEGLLVT----LPKSFDQDPANIALADAFKAKKEDPSGPF----VFPS 307

Query: 307 YDAGQLLVAAVRRA 320
           Y A Q++V  ++ A
Sbjct: 308 YSAVQVIVEGIKAA 321