Pairwise Alignments

Query, 649 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  138 bits (348), Expect = 7e-37
 Identities = 92/331 (27%), Positives = 162/331 (48%), Gaps = 1/331 (0%)

Query: 310 EVASVMARLSSGDIRGRM-TGSYEGDLRALKGNVNRSIDALALLLDEISGFAGALAQGDV 368
           +V S++ +   GD+  R+ T  Y G +R L   +N  ++ L   L +       +A+GD+
Sbjct: 288 QVESLIQKAIKGDLHDRINTSGYNGFMRELGDGINNLLNTLVEPLGQCITVMSRVAEGDL 347

Query: 369 TRTVDGAHQGDFAAIKNNLNRAVEQLAAVLRAVNGSTEQVATSATETAAAAIDVSRQAAG 428
             ++   +QG+F  + + +N ++  L  ++  +  S+ +VAT++TE A    D+S++   
Sbjct: 348 NTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEIADGNNDLSQRVEA 407

Query: 429 QMMTLADVSGAIEQTAGAIGEIARNAERGSTLARGTADLAEDGQRTLISLTRAVDGIAER 488
           Q   L + + ++E+    + + A NA+  + LA   A  A  G   +     A+  I   
Sbjct: 408 QASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKAARGGEVVGEAISAMGAINTA 467

Query: 489 TAGIERISALIAGIADKTYVLALNAGLEAVRAGESGRGFGLIAAKISSLAEDVTAATRDI 548
           +  I  I ++I  IA +T +LALNA +EA RAGE GRGF ++A ++ +LA+    A ++I
Sbjct: 468 SKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAGAAKEI 527

Query: 549 GTLVREASAGVETGVQAAGEAAEAIGRIVEASRDSGSTAQSIAAAIDEQNAMASLLKDRV 608
             L+ ++   V  G +   E+   +  IVEA          IAA+  EQ+     +   +
Sbjct: 528 KGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIAQIAASSVEQSTGIDEINRAI 587

Query: 609 EQLSMTGQATAGAAEEISATMASLTDMAQRL 639
             +    Q  A   EE SA   SL D  + L
Sbjct: 588 AAMDEMTQQNASLVEETSAASQSLKDEGKEL 618



 Score = 53.1 bits (126), Expect = 4e-11
 Identities = 71/310 (22%), Positives = 133/310 (42%), Gaps = 50/310 (16%)

Query: 208 IIRSITVPLGQARDVIDRMARGDLNVTVADDGRRDEIGHMLRATAGIAATLKAVAGDLRD 267
           ++ ++  PLGQ   V+ R+A GDLN +++++  + E G        +A+ + A   +LR+
Sbjct: 324 LLNTLVEPLGQCITVMSRVAEGDLNTSMSEE-YQGEFGR-------LASAVNASIVNLRN 375

Query: 268 LIEAARGGALSVRVEPERHAGEFAVLVRGANEL---VEVLTTPLFEVASVMARLSSGDIR 324
           +++        + V   R A     +  G N+L   VE   + L E A+ M  +++    
Sbjct: 376 MVD-------KITVSSARVATASTEIADGNNDLSQRVEAQASNLEETAASMEEITA---- 424

Query: 325 GRMTGSYEGDLRALKGNVNRSIDALALLLDEISGFAGALAQGDVTRTVDGAHQGDFAAIK 384
                        ++ N + + DA  L  D     A   A+G     V G       AI 
Sbjct: 425 ------------TVRQNADNAKDANLLATDA----AKKAARGG---EVVGEAISAMGAI- 464

Query: 385 NNLNRAVEQLAAVLRAVNGSTEQVATSATETAAAAIDVSR---QAAGQMMTLADVS-GAI 440
           N  ++ +  + +V+  +   T  +A +A   AA A +  R     AG++  LA  S GA 
Sbjct: 465 NTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAGAA 524

Query: 441 EQTAGAIGEIARNAERGSTLARGTADLAEDGQRTLISLTRAVDGIA----ERTAGIERIS 496
           ++  G I +       GS L   +    ++    ++ ++  +  IA    E++ GI+ I+
Sbjct: 525 KEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIAQIAASSVEQSTGIDEIN 584

Query: 497 ALIAGIADKT 506
             IA + + T
Sbjct: 585 RAIAAMDEMT 594