Pairwise Alignments

Query, 649 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 617 a.a., chemotaxis protein from Burkholderia phytofirmans PsJN

 Score =  147 bits (370), Expect = 2e-39
 Identities = 135/510 (26%), Positives = 232/510 (45%), Gaps = 65/510 (12%)

Query: 189 RTIGLLIGAVLVGVALGVAIIRSITVPLGQARDVIDRMARGDLNVTVADDGRRDEIGHML 248
           RT   ++G +LV + + V ++      L +A   +DR+ARGDL   VA     D   ++L
Sbjct: 8   RTSLTIVGIILVALTVVVGVLGLSA--LNRASQSLDRIARGDL---VAIHALDDASAYLL 62

Query: 249 RA-----------TAGIAATLKAVAGDLRDLI-----------EAARGG----------A 276
           R+            AG A   K      ++L+           +A + G          A
Sbjct: 63  RSRLAVDRFNTLSAAGNADEAKKAIERAQELLTKGNQSWQSYLDAPKPGVDQALLDDVIA 122

Query: 277 LSVRVEPERHAGEFAVLVRGANELVE---VLTTPLFEVASVMARLSSGDIRGRMTGSYEG 333
             + V  E    EFA L   AN++     +  T +  +       ++  I+G    + + 
Sbjct: 123 KRMSVMREGVDPEFAAL--NANDMAAYHAIADTKISPMFIAYDGAAAAVIKGLQQSAVDQ 180

Query: 334 DLRALKGNVNR------SIDALALLLDEISGFA----------------GALAQGDVTRT 371
              A + N++       ++ ALALLL     FA                  +A GD++ T
Sbjct: 181 QASA-QSNISLMTTLIIAVTALALLLVVGIRFALRGLIVQPLADATACFERIAAGDLSET 239

Query: 372 VDGAHQGDFAAIKNNLNRAVEQLAAVLRAVNGSTEQVATSATETAAAAIDVSRQAAGQMM 431
           ++   + +   +   + R  E ++ +++AV+ STE + T A E A    D+S++   Q  
Sbjct: 240 INVFSRNEIGRLFAGIKRMQESMSTMVKAVHSSTESIDTGAREIAMGNTDLSQRTEQQAA 299

Query: 432 TLADVSGAIEQTAGAIGEIARNAERGSTLARGTADLAEDGQRTLISLTRAVDGIAERTAG 491
           +L + + ++EQ  G + + A NA + S LA   +D+A  G   +  +   +  IA  +  
Sbjct: 300 SLQETASSMEQLTGTVRQNAENARQASQLAVNASDIATRGGDVVGQVVTTMQDIASSSNK 359

Query: 492 IERISALIAGIADKTYVLALNAGLEAVRAGESGRGFGLIAAKISSLAEDVTAATRDIGTL 551
           +  I  +I GIA +T +LALNA +EA RAGE GRGF ++A ++ SLA+   +A ++I  L
Sbjct: 360 VVDIIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAKEIKEL 419

Query: 552 VREASAGVETGVQAAGEAAEAIGRIVEASRDSGSTAQSIAAAIDEQNAMASLLKDRVEQL 611
           + ++   V++G    G A   +  IV+A R        I+AA +EQ+     +   V Q+
Sbjct: 420 IGDSVDKVQSGSALVGRAGTTMDEIVQAVRRVTDIMGEISAASEEQSGGIEQVNRAVVQM 479

Query: 612 SMTGQATAGAAEEISATMASLTDMAQRLKA 641
               Q  A   E+ +A  ASL D  ++L+A
Sbjct: 480 DEVTQQNAALVEQAAAAAASLEDQTRQLQA 509



 Score = 69.7 bits (169), Expect = 4e-16
 Identities = 147/659 (22%), Positives = 267/659 (40%), Gaps = 81/659 (12%)

Query: 1   MFKNLKIGKKLAVLVVVLNAFTAIIGLIALHGMKMGNDALDTVYNDRVVPLRDLK----- 55
           M     I   L ++ ++L A T ++G++ L  +   + +LD +    +V +  L      
Sbjct: 1   MLSRWSIRTSLTIVGIILVALTVVVGVLGLSALNRASQSLDRIARGDLVAIHALDDASAY 60

Query: 56  VIADLYAVNIVDMAHKARNGNMPTEAALAAIDAARTGIREKWRGYLATYLVDEEKAL--- 112
           ++    AV+  +    A N +   +A   A +    G  + W+ YL       ++AL   
Sbjct: 61  LLRSRLAVDRFNTLSAAGNADEAKKAIERAQELLTKG-NQSWQSYLDAPKPGVDQALLDD 119

Query: 113 -VAKAEPLMADADRAADRLRGILAAGRSERLDRFVIDELYPAIEPVSDAMSALIE-LQLT 170
            +AK   +M +     D     L A            ++ P       A +A+I+ LQ  
Sbjct: 120 VIAKRMSVMRE---GVDPEFAALNANDMAAYHAIADTKISPMFIAYDGAAAAVIKGLQ-- 174

Query: 171 VAKSVYQQNDALYDLTVRRTIGLLIGAVLVGVALGV--AIIRSITVPLGQARDVIDRMAR 228
              +V QQ  A  ++++  T+ + + A+ + + +G+  A+   I  PL  A    +R+A 
Sbjct: 175 -QSAVDQQASAQSNISLMTTLIIAVTALALLLVVGIRFALRGLIVQPLADATACFERIAA 233

Query: 229 GDLNVTVADDGRRDEIGHMLRATAGIAATLKAVAGDLRDLIEAARGGALSVRVEPERHAG 288
           GDL+ T+ +   R+EIG +        A +K +   +  +++A      S+    +  A 
Sbjct: 234 GDLSETI-NVFSRNEIGRLF-------AGIKRMQESMSTMVKAVHSSTESI----DTGAR 281

Query: 289 EFAVLVRGANELVEVLTTPLFEVASVMARLSSGDIRGRMTGSYEGDLRALKGNVNRSIDA 348
           E A+     ++  E     L E AS M +L +G +R     +             R    
Sbjct: 282 EIAMGNTDLSQRTEQQAASLQETASSMEQL-TGTVRQNAENA-------------RQASQ 327

Query: 349 LALLLDEISGFAGALAQGDVTRTVDGAHQGDFAAIKNNLNRAVEQLAAVLRAVNGSTEQV 408
           LA+   +I+   G +  G V  T+      D A+  N     V  +  V+  +   T  +
Sbjct: 328 LAVNASDIATRGGDVV-GQVVTTMQ-----DIASSSNK----VVDIIGVIEGIAFQTNIL 377

Query: 409 ATSATETAAAAIDVSR---QAAGQMMTLADVS-GAIEQTAGAIGEIARNAERGSTL---A 461
           A +A   AA A +  R     AG++ +LA  S  A ++    IG+     + GS L   A
Sbjct: 378 ALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSASAAKEIKELIGDSVDKVQSGSALVGRA 437

Query: 462 RGTADLAEDGQRTLISLTRAVDGIA-ERTAGIERISALIAGIADKTY---VLALNAGLEA 517
             T D      R +  +   +   + E++ GIE+++  +  + + T     L   A   A
Sbjct: 438 GTTMDEIVQAVRRVTDIMGEISAASEEQSGGIEQVNRAVVQMDEVTQQNAALVEQAAAAA 497

Query: 518 VRAGESGRGFGLIAA--KISSLA-EDVTAATRDIGTLVREASAGVETGVQAAGEAAEAIG 574
               +  R    +    K++  A  +  AATR   T  R  S+  +   +AA  A+   G
Sbjct: 498 ASLEDQTRQLQAVVNGWKVAGGAVHNSAAATRSQSTASRVTSSKSKPAAKAAPHASVNGG 557

Query: 575 RIVEASRDSGSTAQSIAAAIDEQNAMASLLKDRVEQLSMTGQATAGAAEEISATMASLT 633
               A++ + +TA + A+A  +  A       RVE        TA AA E +A  A+++
Sbjct: 558 ----AAQPAANTASASASASHDAGAA------RVE--PALKPKTARAASESAARPAAVS 604