Pairwise Alignments

Query, 363 a.a., Ribose import permease protein RbsC from Azospirillum sp. SherDot2

Subject, 321 a.a., ribose ABC transporter permease from Klebsiella michiganensis M5al

 Score =  220 bits (561), Expect = 4e-62
 Identities = 139/331 (41%), Positives = 190/331 (57%), Gaps = 15/331 (4%)

Query: 28  MSGP-ISGRVMNDRRKDLIQKFAALAGLLVLVAVFSATSDAFLSVGNGMTIALQVTSIAY 86
           M+ P +SGR    +   + QK  +L  LLVL+A+ S  S  F +V N   I  Q +  A 
Sbjct: 1   MNNPAVSGRRYFTKAWLMEQK--SLIALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAI 58

Query: 87  LGIAATCVIITGGIDLSVGSVLALSGVAAALAVKAGAPVPLGMGLGILVGAFCGLLNGLC 146
           + +  T VI+T GIDLSVGS+LAL+G  AA  V       + +   + +GA  G + G+ 
Sbjct: 59  MAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVI 118

Query: 147 VTRLKLPPFIATLGMMMVARGVALQITGARAVSGLGDSFGELGNGAMFRIVRIGEDGFPD 206
           V + ++  FIATL MM++ RGV +  T    V+      G   N  +F    IG      
Sbjct: 119 VAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNT-----GFTDNADLFGWFGIGRP---- 169

Query: 207 VVFPGIPYPVVLMVVIAIAVAIMLSRTTLGRHIYAVGSNAEAARLSGVNVVGVTLFTYVL 266
               GIP PV +M ++ +A   ML  T LGR+IYA+G N  A RLSG++V  V +  Y L
Sbjct: 170 ---LGIPTPVWIMAIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGISVNKVKIIVYSL 226

Query: 267 SGTLAGLTGCVLMSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIG 326
            G LA L G + ++RL +AQP  G  YELDAIA+ V+GGTSL GG G I GT IGA ++G
Sbjct: 227 CGMLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILG 286

Query: 327 ILRNGLNMNGVSAFTQQIIIGLVILLTVWID 357
            L NGLN+ GVS++ Q I+  +VILL V +D
Sbjct: 287 FLNNGLNLLGVSSYYQMIVKAVVILLAVLVD 317