Pairwise Alignments

Query, 271 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 260 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  235 bits (599), Expect = 8e-67
 Identities = 124/254 (48%), Positives = 165/254 (64%), Gaps = 2/254 (0%)

Query: 8   PTRVLHYAFCCAMMVFLVGPILAVIPISFSSAGFLSYPIPGLSLQWYDKVLAASGPWLPA 67
           P ++  +AF    ++FLV P++A++P++F+S+  L+YPIP  SL+W++++  A   W  A
Sbjct: 2   PMKLAKFAFASLTILFLVAPLIAILPLAFTSSVILTYPIPSWSLRWFEELFTADA-WRRA 60

Query: 68  LRNSLIVGTGAMALATVLGTLAALGLARNDLPVRSFLLGLLIAPMVVPVVISGVAMYFLF 127
           + NSLI+GTG   LAT+LGT A+LGL    +  R  +  L + PMVVP V+ GV M  L 
Sbjct: 61  IFNSLIIGTGTTLLATILGTAASLGLRNRLIFFRGSMRTLFLLPMVVPAVVLGVGMQVLL 120

Query: 128 ARIGLTASYAGLILAHAVLGAPFVVITVTATLRNFDTTLVRAAYSLGASPVRAFLTVTLP 187
           A  GLT SYAG+I+AH V+  PFVV++V   L   D  +  AA SLGASP   F  VTLP
Sbjct: 121 AGFGLTNSYAGVIIAHTVVAVPFVVVSVIGALDGIDERVELAAQSLGASPATVFHRVTLP 180

Query: 188 LILPGVLSGGLFAFIFSFDEVVVALFIGGPEQRTLPRQMFDGIRDTIDPSILAMSTLLVG 247
           L LPGVLSG + AF  S DEVV+ LF+ GP QRTL RQMF  IR+ I P+I A + L + 
Sbjct: 181 LALPGVLSGAVLAFATSLDEVVLTLFVAGPNQRTLARQMFSSIRENISPAIAAAAFLFIA 240

Query: 248 VTIVFMGLLARLGR 261
            TI F GL+  L R
Sbjct: 241 ATI-FFGLVVVLSR 253