Pairwise Alignments

Query, 313 a.a., HTH-type transcriptional regulator PgrR from Azospirillum sp. SherDot2

Subject, 304 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  177 bits (449), Expect = 3e-49
 Identities = 104/297 (35%), Positives = 165/297 (55%), Gaps = 9/297 (3%)

Query: 1   MQDLNDTIAFVKVVEEGSFTKAARRLRLPKTTLSRKVRDLEQRLGIQLLHRTTRRIGLTE 60
           +  LN    FV+VVE GSF+  AR L+  + T+S+ +R LE  LG +L+ R+TR++ LT+
Sbjct: 1   LDKLNAMAVFVRVVERGSFSAVARELQTSQPTISKILRALETELGGKLIARSTRQLSLTD 60

Query: 61  AGTVYFERCRRIAEELEQAESAVAQLRDAPRGWLRITTPPSFGMTVIAPLLPDFRSRYPD 120
            G  Y+  CR+I   ++ AE +    R+A  G LR+ +  SFG   IA  LPDF  RYP 
Sbjct: 61  EGQRYYNECRQILVAVDSAEHSFQSGREAVAGPLRVGSSVSFGRLQIAARLPDFLERYPH 120

Query: 121 VRIDLVLSHENLDLVARDIDLAIRMGALQDSSMAARKLGVLHRHVYAAPSYCAAHGLPVH 180
           V IDL LS +N DLV+  +D+ +R+G L DS + AR++G  HR   A+P+Y A HG P  
Sbjct: 121 VEIDLQLSDQNQDLVSEGLDVTLRIGELSDSGLIARQIGTTHRVTVASPNYLARHGQPHT 180

Query: 181 PDALIRH-LTLANMTARRPSGFGWRLFRTDGGQPGDGVDAVIDPVMSADDPEMLVPTLLA 239
           P+ L +H   L N+ + +     W   +          +  I     +++ E +   +L 
Sbjct: 181 PEELSQHNCLLFNLLSSQNQ---WIYEKN-----AQRYNVRIKGNAQSNNSEAIREMVLG 232

Query: 240 GGGLVLATDFAMRSYRSAGQVQRVLDGWKGADVDLHAVFPGGRIQPPKVRSFLDFLA 296
           G G+ L+  +       AG+V  +L  ++   + +HAVFP  R Q  +V++F+D+++
Sbjct: 233 GLGIALSPVWLFSEDLKAGRVIAILQDYRAQSLPIHAVFPANRRQSARVKAFVDYMS 289