Pairwise Alignments

Query, 351 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 280 a.a., N-Acetyl-D-glucosamine ABC transport system, permease component 2 (from data) from Phaeobacter inhibens DSM 17395

 Score =  135 bits (341), Expect = 1e-36
 Identities = 74/219 (33%), Positives = 125/219 (57%), Gaps = 2/219 (0%)

Query: 135 YTDPLTQFDFLRFLRNSLVVTVVATVITLIINSMAAYALSVYEFRGKSVAMLGVIGTLMI 194
           Y   L Q DF  + +NS++VTVV+  + L+  +MAA+AL+ Y F+G  +  L +   +MI
Sbjct: 62  YQTVLKQGDFFLYFQNSMIVTVVSLALVLLFGAMAAFALAEYRFKGNMLLGLYLALGIMI 121

Query: 195 PITIILAPVYLVVTKLGFVDSLWAVILPGAAT--PTGVFLLRQYMLTIPRDLIEAARMDK 252
           PI I    +  ++   G V++L A+IL   A   P  VF+L ++M  +  DL  A R+D 
Sbjct: 122 PIRIGTVAILELMVDTGLVNTLTALILVYTAQGLPLAVFILSEFMKQVSDDLKNAGRIDG 181

Query: 253 ASEWRIYARIVMPLSMPALAVLAIFSVMWRWNEFLWPLAVLTKTEVHTLPIALNAFQGEL 312
            SE+ I+ R+V+PL  PA+A +A+F+++  WN+  +PL +    E  TL +    F G+ 
Sbjct: 182 LSEYTIFFRLVLPLVRPAMATVAVFNMIPIWNDLWFPLILAPAEETKTLTLGSQVFIGQF 241

Query: 313 QTQWHYLLAMTVVTLLPVALVFAFLQRFITSGIANTGMK 351
            T W+ +L+   + +LPV +++    R +  GI +  +K
Sbjct: 242 VTDWNAVLSALSMAILPVMVLYVIFSRQLIRGITSGAVK 280