Pairwise Alignments

Query, 282 a.a., Glycine betaine transport system permease protein OpuAB from Azospirillum sp. SherDot2

Subject, 283 a.a., Histidine ABC transporter, permease protein (TC 3.A.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  196 bits (497), Expect = 6e-55
 Identities = 105/262 (40%), Positives = 167/262 (63%), Gaps = 5/262 (1%)

Query: 12  WLAPAVDWLNMNFRPLFAFIGLVIESTLGGINALLLSMPPYALVALSVVFALLLANRRIA 71
           W+   VD L  N+  +F  I   +   +  +  LL  M P+ L+ L++V  +     R  
Sbjct: 13  WVNGWVDALVTNYGDVFRHISDTLLWAIVNLEGLL-RMAPWWLM-LAIVGGIAWHATRKV 70

Query: 72  VLVAAAMGFCYIAG---LWQATVQTVTLVTISVVISVAIAFPLGVVASRVRMVEAGLRPL 128
           V  A  +G  ++ G   LW   +QT+ L+ ++ +ISV I  PLG++++R   + + L PL
Sbjct: 71  VATAVIVGLLFLVGAVGLWDKLMQTLALMLVATLISVLIGIPLGILSARSNRLRSVLMPL 130

Query: 129 LDVMQTVPPWVYLIPAVIVFSLGSVPAIIATVIYGVPPMLRLTTLAFKQVPKDLLELGQA 188
           LD+MQT+P +VYLIP +++F LG VPAI ATVIY  PP++RLT L  +QV  +++E   A
Sbjct: 131 LDIMQTMPSFVYLIPVLMLFGLGKVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINA 190

Query: 189 IGATRQAILFKIELPAAMPTLLVGLNQCILLSLAMVVLAGLVGAGGLGAEVTRGLTRMEM 248
            GA R   LF ++LP A+P+++ G+NQ  +++L+MVV+A ++GA GLG +V  G+  + +
Sbjct: 191 FGANRWQQLFGVQLPLALPSIMAGINQTTMMALSMVVIASMIGARGLGEDVLVGIQTLNV 250

Query: 249 GVGLRAGLAIVAVAIVLDRLSR 270
           G GL AGLAIV +A+V+DR+++
Sbjct: 251 GRGLEAGLAIVILAVVIDRITQ 272