Pairwise Alignments

Query, 282 a.a., Glycine betaine transport system permease protein OpuAB from Azospirillum sp. SherDot2

Subject, 282 a.a., choline ABC transporter permease subunit from Pseudomonas sp. BP01

 Score =  206 bits (524), Expect = 5e-58
 Identities = 107/262 (40%), Positives = 163/262 (62%), Gaps = 1/262 (0%)

Query: 10  GAWLAPAVDWLNMNFRPLFAFIGLVIESTLGGINALLLSMPPYALVALSVVFALLLANR- 68
           G ++A  V+WL  N    F  I   +E  + G+ + L    P+ L+AL    A L+  + 
Sbjct: 11  GQYIASFVEWLTQNGANYFDAIAQGLEFMIHGVTSALTWFNPFVLIALFAGLAHLIQRKW 70

Query: 69  RIAVLVAAAMGFCYIAGLWQATVQTVTLVTISVVISVAIAFPLGVVASRVRMVEAGLRPL 128
            +   VA +    +  G WQ T++T+  VT + V+ V I  PLG++A+   M    +RP+
Sbjct: 71  GLTAFVALSFLLIFNLGYWQETMETLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPV 130

Query: 129 LDVMQTVPPWVYLIPAVIVFSLGSVPAIIATVIYGVPPMLRLTTLAFKQVPKDLLELGQA 188
           LD+MQTVP +VYLIP + +F LG VP +I+TV++ +   +RLT L    VP++L++ G+A
Sbjct: 131 LDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGICDVPQELMDAGKA 190

Query: 189 IGATRQAILFKIELPAAMPTLLVGLNQCILLSLAMVVLAGLVGAGGLGAEVTRGLTRMEM 248
            G +R+ +L +IELP AMP++  G+ QCI+LSL+MVV+A LVGA GLG  V   L   ++
Sbjct: 191 FGCSRRQLLTRIELPHAMPSIAAGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTADI 250

Query: 249 GVGLRAGLAIVAVAIVLDRLSR 270
            +G  AGLAIV +AI+LDR+ +
Sbjct: 251 SLGFEAGLAIVLLAIMLDRICK 272