Pairwise Alignments

Query, 292 a.a., HTH-type transcriptional activator RhaS from Azospirillum sp. SherDot2

Subject, 291 a.a., helix-turn-helix domain-containing protein from Pseudomonas sp. BP01

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 14/196 (7%)

Query: 96  YASTLGFCYDATVMFDLEALEERLQHGVSRSNGEAPRLRYAEPRIWTLVNMLVAIPEGDS 155
           Y S   F      + D E  E +LQ                +P+       L+ +   + 
Sbjct: 101 YVSEAQFALGCVRLLDREPRELQLQEATFLD----------DPQQAVRFRQLITLAWDEP 150

Query: 156 SYQLYGDSLTAAIFAIAFESQ----ETHRRSGALAPWQLNRVVEYMTRRLPRQVELQELA 211
             +L   SL   I   A  SQ    +  R  G LAP    ++V+Y+   L + + L ELA
Sbjct: 151 GERLLASSLAHEIVDHALLSQVGLRQGLRLKGGLAPNLRRQLVDYIEAHLDQPITLGELA 210

Query: 212 SLVNLSQWHFARAFKASTGMSPYQWQLDARLKEARNLLLATDLTIEDIAIATGFSDHMHL 271
              NLS++HFAR F+ S G+ P+Q+ L  RL  A  LL    + + +IA+  GF+   H 
Sbjct: 211 MRCNLSEYHFARMFRTSFGLPPHQYLLARRLHRACQLLQLGVMPLGEIALLCGFASASHF 270

Query: 272 IRQFRNKIGMPPAAWR 287
             +FR  +G  P  +R
Sbjct: 271 SNRFRQALGATPGEYR 286