Pairwise Alignments

Query, 344 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 400 a.a., ISSod4, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  117 bits (293), Expect = 5e-31
 Identities = 60/247 (24%), Positives = 125/247 (50%), Gaps = 1/247 (0%)

Query: 4   ISKSQVSRLCAEIDERVKTFLGRPIEGDWPYLWLDATYVKVRQNGRIVSVAVTIAVAVNT 63
           +S + VS +  ++   +K +  RP++  +P +WLDA + KV+++GR VS AV   +A+N 
Sbjct: 128 VSNATVSAITDKLIPELKAWQQRPLDSHYPIVWLDAIHYKVKEDGRYVSKAVYTLLALNM 187

Query: 64  DGRREVLGMDIGPSEAETFWIEFLRKLKRRGLNGVKLVISDAHGGIKAAVTRVFQAT-WQ 122
            G++E+LG+ +  +E   +W+  L  L  RG+  + +   D   G   A+  +F  T  Q
Sbjct: 188 KGKKEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASIFPHTETQ 247

Query: 123 RCRVHFSRPALAHAGKSGRRVVAAFIATAFAQDDAASARTQWRQIADQVRVKLPKLTALM 182
            C +H  R ++ +     ++   A +   +      +A     ++  +     P +    
Sbjct: 248 LCVIHQIRNSMKYVASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDAYPLVINSW 307

Query: 183 DEAEEDVLAYMTFPKEHRAKLHSTNPIERLNGEIKRRTEVVGIFPNEEAITRLIGAILLE 242
                ++  Y  +P+  R  +++TN +E ++ + ++ T+  G FPNE ++ +L+ A +L 
Sbjct: 308 RRKWHNLSHYFKYPEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKLLYAGILN 367

Query: 243 QNDEWAV 249
            +D+W +
Sbjct: 368 ASDKWTM 374