Pairwise Alignments

Query, 226 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 319 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas fluorescens FW300-N2E3

 Score =  102 bits (253), Expect = 1e-26
 Identities = 74/217 (34%), Positives = 109/217 (50%), Gaps = 15/217 (6%)

Query: 5   QIQDRILYRDGLMLILDKPAGLPVHAGPAGGPNLERHFDALRFGFPKPPSLAHRLDRDTS 64
           +++  I++ D  +++++KP G+ VH G      +   F  LR    K   L HRLDRDTS
Sbjct: 92  RLEASIVFEDKALIVINKPCGIAVHGGSGLNYGVIEAFRQLRPDC-KELELVHRLDRDTS 150

Query: 65  GCLILGRHAKALRKIGILFQNGKVDKTYWAVVAGTPPQESGRIELPLAKVSNKTGGWRI- 123
           G L++ +    LR +    +   VDK Y A+V G       ++  PL K SN   G R+ 
Sbjct: 151 GLLMIAKKRSMLRHLHTALRGDGVDKRYMALVRGNWAASIKQVRAPLGK-SNLRSGERMV 209

Query: 124 -VGSPDGQAAVTDY-VVRGQADGLTWLELTPHTGRTHQIRVHCASIGCPLVGDPQYGGPE 181
            V   +G+ +VT + V+R   D  T +E  P TGRTHQIRVH    G  + GD +YG  +
Sbjct: 210 EVDEEEGKESVTVFKVLRRFGDFATLIEAKPITGRTHQIRVHTLHAGHCIAGDTKYGDDD 269

Query: 182 ---------GKPLHLHSRAISLPLYPKRDPVGAVAPV 209
                    GK L LH+  +++ L P    +   APV
Sbjct: 270 FSKEIRDLGGKRLFLHAYMLTVSL-PDGGELKLQAPV 305