Pairwise Alignments

Query, 309 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 570 a.a., ABC transporter permease from Azospirillum brasilense Sp245

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 18/248 (7%)

Query: 47  ALAMVALFFLYPLGLSAVS----AFQGRD-GGWTLANIAKAF--ELYSLDMAFTLAIVLL 99
           A  ++ALF L  L +  V     AFQ +  G +TL N    F  +L+      +  +  +
Sbjct: 21  AAVLIALFLLLFLVVPVVQVIFVAFQDKTTGSFTLINFVDFFRNDLFMRSFWNSFYVSAM 80

Query: 100 SSALVAVLSVAIGGYLTLGENRLAVTLLRWLYRWPLFIPFIVAAQMMRSFLAKNGLMNNL 159
           S  + + L++ +    T  E R AV L++ L   PL +P  + A  M+    +NG +N L
Sbjct: 81  SVVVASALALPLAYLTTRFEFRGAV-LIQSLGIIPLIMPPFIGAVAMQLLFGRNGTVNLL 139

Query: 160 LIGG-GVIEPLQAASLLDWRGVVVTFVWKQTPFVALMVAGAMASLDRSTIEAARDLGAGR 218
           L    G+  P          GV+        PF+ + ++ ++ ++DR+  E+A++LG   
Sbjct: 140 LRDHFGISIPFMEGL----NGVIFVQSIHYFPFILINLSASLKNIDRAMEESAQNLGCHG 195

Query: 219 LRILAEIVVPQVRPTLVVGLILSFVTMLSVMSVPMMINPNSPTMITVDMAYRINAHGDYG 278
            R+   IV P   P  V G  L F+ +   +  P+++N N   M+      RI++    G
Sbjct: 196 FRLFRRIVFPLAMPGYVAGASLVFIKVFDDLGTPLLLNVND--MLAPQAYLRISS---IG 250

Query: 279 VANALGFV 286
           +A+ +G+V
Sbjct: 251 IADPMGYV 258



 Score = 57.4 bits (137), Expect = 8e-13
 Identities = 72/299 (24%), Positives = 120/299 (40%), Gaps = 31/299 (10%)

Query: 20  RGGDGAPALPAARTVPDWL---WGVLLVLPALAMVALFFLYPLGLSAVSAFQGRDGGWTL 76
           RGG G   L   R  P  L   + V+L++  L +     L  L  + + +F      +T+
Sbjct: 288 RGGGG---LARRRMKPLELVAAYAVVLLILVLVLAPHIGLTLLSFATIWSFSPFPDAFTM 344

Query: 77  ANIAKAFELYSLDMAFTLAIVLLSSALVAVLSVAIG---GYLTLGENRLAVTLLRWLYRW 133
            +    F    L+    +   LL ++L A+L V IG    YL L         L ++   
Sbjct: 345 KHYGTVF----LESGQYITNTLLYASLAALLDVVIGTAIAYLVLRSKLPGRQWLDYIAMA 400

Query: 134 PLFIPFIVAA-QMMRSFLAKNGLMNNLLIGGGVIEPLQAASLLD-WRGVVVTFVWKQTPF 191
            L +P +V     +RSF               V  P     L   W  +V     ++ P+
Sbjct: 401 ALAVPGVVLGIGYLRSFY-------------DVPMPFTGQPLSGFWLILVFALAIRRLPY 447

Query: 192 VALMVAGAMASLDRSTIEAARDLGAGRLRILAEIVVPQVRPTLVVGLILSFVTMLSVMSV 251
                  A+  +  S  EAA +LGA +LR ++ +VVP +   ++ G + SF T    +S 
Sbjct: 448 ALRACTAALQQVSNSLEEAAENLGATKLRTISRVVVPLMSGGILAGFVTSFATAAVELSA 507

Query: 252 P-MMINPNSPTMITVDMAYRINAHGDYGVANALGFVSYAMAGLVGWFYLRHGVRQGGAR 309
             M+++  S   +   +   + +    G   ALG  +  + GL    YL H + + G R
Sbjct: 508 TIMLVHSQSDAPLAYGLYVYMQSAAGRGPGAALGVFAVVIVGL--GTYLSHVIIERGRR 564