Pairwise Alignments

Query, 352 a.a., D-xylose-binding periplasmic protein from Azospirillum sp. SherDot2

Subject, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2C3

 Score =  239 bits (609), Expect = 1e-67
 Identities = 137/324 (42%), Positives = 196/324 (60%), Gaps = 8/324 (2%)

Query: 16  LAAATTMTSTAALA--AGTTVGVSWSNFQEERWKTDEAAIKAVIEKAGGKYLSADAQSSP 73
           LA A  + S   +A  A   +G S  + + ERW  D     A  EK   K     A ++ 
Sbjct: 9   LAGALALLSLPVMADAAHPKIGFSIDDLRLERWSRDRDYFVAAAEKLDAKVFVQSADANE 68

Query: 74  AKQLSDIESLISRGANALIILAQDSDAIRPAVEKAAAEGIPVVGYDRLI-EIPSAFYITF 132
            KQ+S IE+LISRG + ++I+  ++  +  AV +A   GI VV YDRLI       YI+F
Sbjct: 69  QKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLILNADIDAYISF 128

Query: 133 DNKEVGRLQARSVFAMKPKGNYAFIKGSSTDPNADFLFAGQMEVLKAAIDRGDVKNVGEA 192
           DN++VG +QA  V    PKGNY  + G+ TD NA  L  GQM+VL+ AID+GD+K VG+ 
Sbjct: 129 DNEKVGEMQASGVLKAAPKGNYFLLGGAPTDNNAKVLREGQMKVLQPAIDKGDIKIVGQQ 188

Query: 193 YTDKWLPAIAQQNMEQILTKNGNKVDAVVASNDGTAGGAVAALAAQGLAGTVPVSGQDGD 252
           +  +W P  A   +E  LT+N NK+D +VASND TAGGA+ ALAAQ +AG VP+SGQD D
Sbjct: 189 WVKEWNPTEALSIVENALTRNNNKIDGIVASNDATAGGAIQALAAQKMAGKVPISGQDAD 248

Query: 253 KAALNRIALGTQTVSVWKDARELGRRAAEIAMDLAGGKKMTDISGATTFDGGPKKQKMTS 312
            AA+ R+  GTQT++V+K  + +   AA++++ LA  +K T    ++ +D G K  K+ +
Sbjct: 249 LAAVKRVIDGTQTMTVYKPLKLIASEAAKLSVQLARNEKPT---FSSQYDNGSK--KVDT 303

Query: 313 LFLTPIAITKDNLGQVIDAGWVTK 336
           + LTP  +TKDN+  +   G+ TK
Sbjct: 304 ILLTPTPLTKDNIDLLEKDGFYTK 327