Pairwise Alignments

Query, 352 a.a., D-xylose-binding periplasmic protein from Azospirillum sp. SherDot2

Subject, 356 a.a., L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) from Acidovorax sp. GW101-3H11

 Score =  137 bits (344), Expect = 6e-37
 Identities = 107/343 (31%), Positives = 170/343 (49%), Gaps = 26/343 (7%)

Query: 7   ATAAGLFLTLAAATTMTSTAALAAGTTVGVSWSNFQEERWKTDEAAIKAVIEKAGGKYLS 66
           A  A + LT   AT++ S     A   +G+S       RW  D   +  V+++ G K   
Sbjct: 8   AVLASMALTAIGATSVASAQDKGA---IGISMPTKSSARWIADGDNMVKVLKERGYKTDL 64

Query: 67  ADAQSSPAKQLSDIESLISRGANALIILAQDSDAIRPAVEKAAAEGIPVVGYDRLIEIPS 126
             A      QL+ IE++I++GA  L+I + D   +  A++ AA +G+ V+ YDRLI+   
Sbjct: 65  QYADDDIPNQLAQIENMITKGAKVLVIASIDGTTLSKALQNAADKGVKVIAYDRLIKGSK 124

Query: 127 --AFYITFDNKEVGRLQARSVF----AMKPKG--NYAFIKGSSTDPNADFLFAGQMEVLK 178
              +Y TFDN +VG LQA S+       + KG  N     GS  D NA F + G M VL+
Sbjct: 125 NVDYYATFDNFQVGVLQATSIVDKLGLKQGKGPFNIELFGGSPDDNNAFFFYDGAMSVLQ 184

Query: 179 AAIDRGDV------KNVGEAYTDKWLPAIAQQNMEQILTK--NGNKVDAVVASNDGTAGG 230
             ID G +        + +  T +W  ++AQ  M+ +L+     +KV AV++  DG + G
Sbjct: 185 PYIDSGKLVVRSKQTGMNKVGTLRWDGSVAQARMDNLLSAYYGKDKVHAVLSPYDGISIG 244

Query: 231 AVAALAAQGLAGTVP----VSGQDGDKAALNRIALGTQTVSVWKDARELGRRAAEIAMDL 286
            +++L   G          VSGQD +  ++  I  G Q+ +V+KD REL + AA +   +
Sbjct: 245 ILSSLKGVGYCTAQQPCPVVSGQDAEVPSIKSILKGEQSSTVFKDTRELAKVAANMVDAV 304

Query: 287 AGGKKMTDISGATTFDGGPKKQKMTSLFLTPIAITKDNLGQVI 329
             GK+  +I+   T++ G K   + S  L P+A+   N   V+
Sbjct: 305 LTGKQ-PEINDTKTYNNGVK--VVPSYLLKPVAVDSSNWNAVL 344