Pairwise Alignments

Query, 1062 a.a., multidrug efflux RND transporter permease subunit OqxB28 from Azospirillum sp. SherDot2

Subject, 1065 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family transporter from Dechlorosoma suillum PS

 Score = 1612 bits (4175), Expect = 0.0
 Identities = 825/1039 (79%), Positives = 914/1039 (87%)

Query: 1    MNISKFFIDRPIFAGVLSVALFLAGAIAVFRLPISEYPEVVPPSVVVRAQFPGANPKVIA 60
            MNISKFFIDRPIFAGVLS+ + LAG ++VF+LPISEYPEVVPPSVVVRAQ+PGANPKVIA
Sbjct: 1    MNISKFFIDRPIFAGVLSILILLAGVLSVFQLPISEYPEVVPPSVVVRAQYPGANPKVIA 60

Query: 61   ETVASPLEEQINGVEGMLYMQSQANSDGNLALTVTFKLGTDPDKAQQLVQNRVAQAMPRL 120
            ETVA+PLEE INGVE MLYMQSQANSDGNLA+TV FKLG DPDKAQQLVQNRV+QA+PRL
Sbjct: 61   ETVAAPLEESINGVENMLYMQSQANSDGNLAVTVYFKLGIDPDKAQQLVQNRVSQALPRL 120

Query: 121  PSDVQRLGVATVKSSPTLTMVVHLLSPNDRYDMTYLRNYAVLNVKDRLTRISGVGEVQVW 180
            P DVQRLGV TVKSSPTLT+VVHLLSP+DRYD TYLRNYAVLNVKDRL R++GVGEV +W
Sbjct: 121  PEDVQRLGVTTVKSSPTLTLVVHLLSPDDRYDATYLRNYAVLNVKDRLARLNGVGEVSIW 180

Query: 181  GAGDYAMRVWLDPGKVAQRGLTATDVVNSIREQNVQVAAGVIGASPSLPDVPMQLSINAR 240
            GAG+YAMRVWLDP KVAQRGLTA DVV +IREQNVQVAAGVIGASP+  +VP+Q S+NA+
Sbjct: 181  GAGNYAMRVWLDPQKVAQRGLTAGDVVRAIREQNVQVAAGVIGASPNAGNVPLQFSVNAQ 240

Query: 241  GRLKTADEFGDIVLKTGGEGGVTRLRDVARVELAAAQYGLRSLLDNKPAVALGITQTPDA 300
            GRL+T +EF DIVLK+ GEGGVTRL DVARVEL AA+YGLRSLLDNKPA+ +GI Q+P A
Sbjct: 241  GRLQTEEEFRDIVLKSSGEGGVTRLGDVARVELDAAEYGLRSLLDNKPAIGMGIMQSPGA 300

Query: 301  NALAISDEVRKVMAELKGDMPDGVDYSIVYDPTQFVRSSIEAVVHTLLEAVALVVLVVIV 360
            NAL +S +VR+ MAEL  D P  V+Y I YDPTQFVR+SI+AVVHTLLEA+ALVVLVVIV
Sbjct: 301  NALEVSSQVREAMAELAKDFPASVEYRIEYDPTQFVRASIKAVVHTLLEAIALVVLVVIV 360

Query: 361  FLQTWRASIIPLLAVPISIVGTFSLLLAFGFSINALSLFGMVLAIGIVVDDAIVVVENVE 420
            FLQTWRASIIPLLAVP+SIVGTFSL+L FG+SINALSLFGMVLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQTWRASIIPLLAVPVSIVGTFSLMLGFGYSINALSLFGMVLAIGIVVDDAIVVVENVE 420

Query: 421  RNIASGLSARDATIRAMQEVSGPIIAIALTLVAVFVPLAAMTGLTGEFYKQFAMTIAIST 480
            RNI +GL+ R+AT RAM+EVSGPIIAIALTLVAVFVPLA MTGLTG+FYKQFAMTIAIST
Sbjct: 421  RNIEAGLTPREATYRAMREVSGPIIAIALTLVAVFVPLAFMTGLTGQFYKQFAMTIAIST 480

Query: 481  VISAFNSLTLSPALAAVLLRGHDEPQDWLTRAMNRVFGGFFRLFNRVFHRASEGYGRGVG 540
            VISAFNSLTLSPALAA+LL+GH    DWLTR MNR  GGFF  FNR F RAS+ YGRGV 
Sbjct: 481  VISAFNSLTLSPALAAMLLKGHGSEPDWLTRQMNRYLGGFFAGFNRFFRRASDNYGRGVT 540

Query: 541  GVVRRKGVMLAVYALLIGATVLLGRSVPSGFVPMQDKEYLISFAQLPNGASLDRTEAVIR 600
            GV+ RK   + VYA+L+G TV L   VP GFVP QDK+YLI FAQLPNGASLDRTEAVIR
Sbjct: 541  GVLARKASAMGVYAVLLGLTVGLSYLVPGGFVPAQDKQYLIGFAQLPNGASLDRTEAVIR 600

Query: 601  EMTDIALKRPGVQSAVAFPGLSVNGFTNSSSAGIVFVTLKPFAERKDPSLSAGAIAMDLQ 660
            +M +IAL +PGVQSA+AFPGLS+NGFTNSSSAGIVF TLKPF ER+   LSA AIA  L 
Sbjct: 601  QMGEIALAQPGVQSAIAFPGLSINGFTNSSSAGIVFATLKPFDERRGKELSAEAIAGALN 660

Query: 661  QRYAGLKEAFVAIFPPPPVMGLGQLGGFKMQLEDRGNLGYEALSDAVNAFVKRAAQTPEL 720
            Q+YA ++EAF+A+FPPPPVMGLG LGGFK+Q+EDRG LGY  L  A  AF+  A++ PEL
Sbjct: 661  QKYAAIQEAFIAVFPPPPVMGLGTLGGFKLQIEDRGALGYAELDRAAKAFMAAASKAPEL 720

Query: 721  GPTFSAYQINVPQLDVDLDRVKAKQLGVNVADVFDTMQIYLGSLYVNDFNAFGRVYQVRV 780
            GP FS+YQINVPQLDVDLDR KAKQ GV+V DVFDTMQIYLGSLYVNDFN FGRVYQVR 
Sbjct: 721  GPMFSSYQINVPQLDVDLDRTKAKQQGVSVTDVFDTMQIYLGSLYVNDFNRFGRVYQVRA 780

Query: 781  QADAPFRDTADDIGVLKTRNAAGTMVPLSSLVTVQPGYGPEMVVRYNGFTAADVNGGPAP 840
            QADAPFR   +DI  LKTRN  G MVPLSSLV V  G+GPEMVVRYNGFTAAD+NGGPAP
Sbjct: 781  QADAPFRSRPEDILQLKTRNNQGEMVPLSSLVKVSTGFGPEMVVRYNGFTAADINGGPAP 840

Query: 841  GFSSGQAEAAAERIAAEVLPRGVKLEWTDLTYQKILVGNAGLWVFPISVLLVFLVLAAQY 900
            GFSS QAEAA ER+AAE LPRGVK EWTDLTYQKIL GNAG+WVFPIS+LLVFLVLAAQY
Sbjct: 841  GFSSAQAEAAVERVAAETLPRGVKFEWTDLTYQKILAGNAGIWVFPISLLLVFLVLAAQY 900

Query: 901  ESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILIVEFAREL 960
            ESLTLPLA++LIVPMS+L+AL GVWLTGGDNNIFTQIG MVLVGL+ KNAILIVEFAREL
Sbjct: 901  ESLTLPLAVILIVPMSILAALTGVWLTGGDNNIFTQIGLMVLVGLACKNAILIVEFAREL 960

Query: 961  EHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVAVFAGMIG 1020
            E +G   ++AAI+ASRLRLRPILMTSIAF+MGVVPLV SSGAG+EMRHAMG+AVF GM+G
Sbjct: 961  ELQGSTPLRAAIDASRLRLRPILMTSIAFVMGVVPLVLSSGAGSEMRHAMGIAVFFGMLG 1020

Query: 1021 VTLFGLVLTPVFYVLLRKL 1039
            VT FGL LTP FYVLLR L
Sbjct: 1021 VTFFGLFLTPAFYVLLRTL 1039



 Score = 46.6 bits (109), Expect = 1e-08
 Identities = 74/328 (22%), Positives = 132/328 (40%), Gaps = 35/328 (10%)

Query: 738  LDRVKAKQLGVNVADVF-----DTMQIYLGSLYVNDFNA------FGRVYQVRVQADAPF 786
            LD  K  Q G+   DV        +Q+  G +  +  NA      F    Q R+Q +  F
Sbjct: 191  LDPQKVAQRGLTAGDVVRAIREQNVQVAAGVIGASP-NAGNVPLQFSVNAQGRLQTEEEF 249

Query: 787  RD----TADDIGVLKTRNAAGTMVP-----LSSLVTVQPGYGPEMVVRYNGFTAADVNGG 837
            RD    ++ + GV +  + A   +      L SL+  +P  G   +++  G  A +V   
Sbjct: 250  RDIVLKSSGEGGVTRLGDVARVELDAAEYGLRSLLDNKPAIGMG-IMQSPGANALEV--- 305

Query: 838  PAPGFSSGQAEAAAERIAAEVLPRGV--KLEWTDLTYQKILVGNAGLWVFPISVLLVFLV 895
                 SS   EA AE   A+  P  V  ++E+    + +  +  A +     ++ LV LV
Sbjct: 306  -----SSQVREAMAE--LAKDFPASVEYRIEYDPTQFVRASI-KAVVHTLLEAIALVVLV 357

Query: 896  LAAQYESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILIVE 955
            +    ++    +  LL VP+S++     +   G   N  +  G ++ +G+   +AI++VE
Sbjct: 358  VIVFLQTWRASIIPLLAVPVSIVGTFSLMLGFGYSINALSLFGMVLAIGIVVDDAIVVVE 417

Query: 956  FARELEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVAVF 1015
                    G    +A   A R    PI+  ++  +   VPL   +G   +      + + 
Sbjct: 418  NVERNIEAGLTPREATYRAMREVSGPIIAIALTLVAVFVPLAFMTGLTGQFYKQFAMTIA 477

Query: 1016 AGMIGVTLFGLVLTPVFYVLLRKLAGAE 1043
               +      L L+P    +L K  G+E
Sbjct: 478  ISTVISAFNSLTLSPALAAMLLKGHGSE 505