Pairwise Alignments

Query, 1062 a.a., multidrug efflux RND transporter permease subunit OqxB28 from Azospirillum sp. SherDot2

Subject, 1050 a.a., multidrug efflux RND transporter permease subunit OqxB3 from Enterobacter sp. TBS_079

 Score = 1226 bits (3173), Expect = 0.0
 Identities = 626/1039 (60%), Positives = 792/1039 (76%), Gaps = 4/1039 (0%)

Query: 1    MNISKFFIDRPIFAGVLSVALFLAGAIAVFRLPISEYPEVVPPSVVVRAQFPGANPKVIA 60
            M+ S+FFIDRPIFA VLS+ +F+ G IA+  LP+SEYP+VVPPSV VRA++PGANPKVIA
Sbjct: 1    MDFSRFFIDRPIFAAVLSILIFITGLIAIPLLPVSEYPDVVPPSVQVRAEYPGANPKVIA 60

Query: 61   ETVASPLEEQINGVEGMLYMQSQANSDGNLALTVTFKLGTDPDKAQQLVQNRVAQAMPRL 120
            ETVA+PLEE INGVE M+YM+S A SDG L  TVTF+ GTDPD+AQ  VQNRV+QA  RL
Sbjct: 61   ETVATPLEEAINGVENMMYMKSVAGSDGVLVTTVTFRPGTDPDQAQVQVQNRVSQAEARL 120

Query: 121  PSDVQRLGVATVKSSPTLTMVVHLLSPNDRYDMTYLRNYAVLNVKDRLTRISGVGEVQVW 180
            P DV+RLG+ T K SPTLT+VVHL SP  +YD  Y+RNYA L VKD L R+ GVG++Q++
Sbjct: 121  PEDVRRLGITTQKQSPTLTLVVHLFSPGGKYDSLYMRNYATLKVKDELARLPGVGQIQIF 180

Query: 181  GAGDYAMRVWLDPGKVAQRGLTATDVVNSIREQNVQVAAGVIGASPSLPDVPMQLSINAR 240
            G+G+YAMR+WLDP KVA RGLTA+DVV +++EQNVQV+AG +GA P   +    +SINA+
Sbjct: 181  GSGEYAMRIWLDPDKVAARGLTASDVVTAMQEQNVQVSAGQLGAEPLPKESDFLISINAQ 240

Query: 241  GRLKTADEFGDIVLKTGGEGGVTRLRDVARVELAAAQYGLRSLLDNKPAVALGITQTPDA 300
            GRL T +EFG+I+LKT  +G + RLRDVAR+E+ +  Y LRS L+NK AV +GI Q+P A
Sbjct: 241  GRLHTEEEFGNIILKTAQDGSLVRLRDVARIEMGSGSYALRSQLNNKDAVGIGIFQSPGA 300

Query: 301  NALAISDEVRKVMAELKGDMPDGVDYSIVYDPTQFVRSSIEAVVHTLLEAVALVVLVVIV 360
            NA+ +S+ VR  M EL    P+ + ++  YDPT FVR SI AVV TLLEAV LVVLVVI+
Sbjct: 301  NAIDLSNAVRAKMNELATRFPEDMKWAAPYDPTVFVRDSIRAVVQTLLEAVVLVVLVVIL 360

Query: 361  FLQTWRASIIPLLAVPISIVGTFSLLLAFGFSINALSLFGMVLAIGIVVDDAIVVVENVE 420
            FLQTWRASIIPL+AVP+S+VGTFS+L   GFS+N LSLFG+VLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQTWRASIIPLIAVPVSVVGTFSILYLLGFSLNTLSLFGLVLAIGIVVDDAIVVVENVE 420

Query: 421  RNIASGLSARDATIRAMQEVSGPIIAIALTLVAVFVPLAAMTGLTGEFYKQFAMTIAIST 480
            RNI  GLS   A  +AM+EVSGPIIAIAL L AVFVP+A ++G+TG+FYKQFA+TIAIST
Sbjct: 421  RNIEEGLSPLQAAHQAMREVSGPIIAIALVLCAVFVPMAFLSGVTGQFYKQFAVTIAIST 480

Query: 481  VISAFNSLTLSPALAAVLLRGHDEPQDWLTRAMNRVFGGFFRLFNRVFHRASEGYGRGVG 540
            VISA NSLTLSPALAA+LL+ H  P+D+ TR ++R+FG  FR FNR FHR+S GY   VG
Sbjct: 481  VISAINSLTLSPALAALLLKPHGAPKDFPTRLIDRLFGWLFRPFNRFFHRSSNGYQGLVG 540

Query: 541  GVVRRKGVMLAVYALLIGATVLLGRSVPSGFVPMQDKEYLISFAQLPNGASLDRTEAVIR 600
              + R+G +  VY LL+ A  ++ ++VP GF+P QDK YLI   ++P G+SL RT+AVIR
Sbjct: 541  KTLGRRGAVFVVYVLLLCAAGVMFKAVPGGFIPTQDKLYLIGGVKMPEGSSLARTDAVIR 600

Query: 601  EMTDIALKRPGVQSAVAFPGLSVNGFTNSSSAGIVFVTLKPFAERKDPSLSAGAIAMDLQ 660
            +M++I +   GV  AVAFPGL+   FTN+ + G VF  LKPF +RK    +A  I  ++ 
Sbjct: 601  KMSEIGMNTEGVDYAVAFPGLNALQFTNTPNTGTVFFGLKPFDQRKH---TAAEINAEIN 657

Query: 661  QRYAGLKEAFVAIFPPPPVMGLGQLGGFKMQLEDRGNLGYEALSDAVNAFVKRAAQTPEL 720
             + A +++ F     PPP++GLGQ  G+ + ++DRG LGY AL +AVN       QTP +
Sbjct: 658  AKIAQIQQGFGFSILPPPILGLGQGSGYSLYIQDRGGLGYGALQNAVNTMSGAIMQTPGM 717

Query: 721  GPTFSAYQINVPQLDVDLDRVKAKQLGVNVADVFDTMQIYLGSLYVNDFNAFGRVYQVRV 780
                S YQ NVPQLDV +DR KAK  GV++ D+F T+Q YLGS YVNDFN FGR ++V  
Sbjct: 718  HFPISTYQANVPQLDVQVDRDKAKAQGVSLTDLFGTLQTYLGSSYVNDFNQFGRTWRVMA 777

Query: 781  QADAPFRDTADDIGVLKTRNAAGTMVPLSSLVTVQPGYGPEMVVRYNGFTAADVNGGPAP 840
            QAD PFRD+ +DI  L+TRN  G MVP+ S+V +   YGP+ V+RYNG+ AAD+ G   P
Sbjct: 778  QADGPFRDSVEDIANLRTRNNQGEMVPIGSMVNISTTYGPDPVIRYNGYPAADLIGDADP 837

Query: 841  G-FSSGQAEAAAERIAAEVLPRGVKLEWTDLTYQKILVGNAGLWVFPISVLLVFLVLAAQ 899
               SS QA    + ++ ++LP G+ +EWTDL++Q+   GN  L VFP++VLL FLVLAA 
Sbjct: 838  RILSSAQAMTQLDGMSKQILPNGMNIEWTDLSFQQATQGNTALIVFPVAVLLAFLVLAAL 897

Query: 900  YESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILIVEFARE 959
            YES TLPLA++LIVPM++LSALFGVWLTGGDNN+F Q+G +VL+GL+ KNAILIVEFARE
Sbjct: 898  YESWTLPLAVILIVPMTMLSALFGVWLTGGDNNVFVQVGLVVLMGLACKNAILIVEFARE 957

Query: 960  LEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVAVFAGMI 1019
            LE +G+G+++AA+EA RLRLRPI+MTSIAFI G +PL+   GAGAE+R   G+ VF+GM+
Sbjct: 958  LELQGKGIMEAALEACRLRLRPIVMTSIAFIAGTIPLILGHGAGAEVRGVTGITVFSGML 1017

Query: 1020 GVTLFGLVLTPVFYVLLRK 1038
            GVTLFGL LTPVFYV LRK
Sbjct: 1018 GVTLFGLFLTPVFYVTLRK 1036



 Score = 60.5 bits (145), Expect = 6e-13
 Identities = 76/331 (22%), Positives = 138/331 (41%), Gaps = 37/331 (11%)

Query: 736  VDLDRVKAKQLGVNVADVFDTMQ-----IYLGSL----------YVNDFNAFGRVYQVRV 780
            +D D+V A+  G+  +DV   MQ     +  G L          ++   NA GR++    
Sbjct: 191  LDPDKVAAR--GLTASDVVTAMQEQNVQVSAGQLGAEPLPKESDFLISINAQGRLH---- 244

Query: 781  QADAPFRDTADDIG--VLKTRNAAGTMVPLSSLVTVQPGYGPEMV-VRYNGFTAADVNGG 837
                    T ++ G  +LKT    G++V L  +  ++ G G   +  + N   A  +   
Sbjct: 245  --------TEEEFGNIILKTAQD-GSLVRLRDVARIEMGSGSYALRSQLNNKDAVGIGIF 295

Query: 838  PAPGFSSGQAEAAAERIAAEVLPRGVK-LEWTDLTYQKILVGN---AGLWVFPISVLLVF 893
             +PG ++     A      E+  R  + ++W       + V +   A +     +V+LV 
Sbjct: 296  QSPGANAIDLSNAVRAKMNELATRFPEDMKWAAPYDPTVFVRDSIRAVVQTLLEAVVLVV 355

Query: 894  LVLAAQYESLTLPLAILLIVPMSVLSALFGVWLTGGDNNIFTQIGFMVLVGLSAKNAILI 953
            LV+    ++    +  L+ VP+SV+     ++L G   N  +  G ++ +G+   +AI++
Sbjct: 356  LVVILFLQTWRASIIPLIAVPVSVVGTFSILYLLGFSLNTLSLFGLVLAIGIVVDDAIVV 415

Query: 954  VEFARELEHEGRGVVQAAIEASRLRLRPILMTSIAFIMGVVPLVTSSGAGAEMRHAMGVA 1013
            VE       EG   +QAA +A R    PI+  ++      VP+   SG   +      V 
Sbjct: 416  VENVERNIEEGLSPLQAAHQAMREVSGPIIAIALVLCAVFVPMAFLSGVTGQFYKQFAVT 475

Query: 1014 VFAGMIGVTLFGLVLTPVFYVLLRKLAGAER 1044
            +    +   +  L L+P    LL K  GA +
Sbjct: 476  IAISTVISAINSLTLSPALAALLLKPHGAPK 506