Pairwise Alignments

Query, 325 a.a., Ribose import permease protein RbsC from Azospirillum sp. SherDot2

Subject, 339 a.a., D-mannose ABC transporter, permease component (from data) from Herbaspirillum seropedicae SmR1

 Score =  142 bits (357), Expect = 2e-38
 Identities = 93/310 (30%), Positives = 159/310 (51%), Gaps = 18/310 (5%)

Query: 17  LAMVLIGTINPAFWQLDNLFSLMRSNVIIGIMAMGVLLVLISGGIDVSFPAFAVAAMYLT 76
           L + L G     F   +N  +++R   I  ++A G+  V+++ GID+S  +    +  L 
Sbjct: 43  LTLYLSGDGTSNFASAENTMNILRQVAINLVLAAGMTFVILTAGIDLSVGSVLAVSAVLG 102

Query: 77  IKGMLALGYNGVVLPLLAATLMGLAFGAVNGFFVYKFRMIPLIVTLGTSAMVRG--FLLG 134
           ++  L     G  +P+   +  GL  G VNG  V    +   +VTLGT    RG  +LL 
Sbjct: 103 MQVSLGAA-PGWAIPMFIFS--GLVMGMVNGAMVALLNINAFVVTLGTMTAFRGAAYLLA 159

Query: 135 VVGTSMININKMPTALIDFARTDVVSVTKADGTTYGLTAMVLIYLGLALAMHLVLRYTMI 194
             GT+++N N +P+                +G    +  ++ + + + L   ++LR T++
Sbjct: 160 D-GTTVLN-NDIPSF-----------EWIGNGDFLHVPWLIWVAVAVVLLSWVILRKTVL 206

Query: 195 GRSAYALGGDPEAARRAGFDLRKTIFFIYCVAGALAGFAGLLHSGMIWLANPRDFVGLEL 254
           G   YA+GG+ +AAR  G  +   + F+Y ++G  +G AG + +  ++ AN     G EL
Sbjct: 207 GMHIYAIGGNLQAARLTGIRVGLVLLFVYSISGLFSGLAGAMSASRLYGANGNWGSGYEL 266

Query: 255 DVIAAVVLGGASIFGGRGSVLGTMLGVFMLVMVKNSLIIMRVDTTWQLVVVGLIVIAATA 314
           D IAAVVLGG S+ GG GS+ GT++G  ++ ++ N L I+ + + WQ V  G +++ A  
Sbjct: 267 DAIAAVVLGGTSLMGGVGSIWGTVVGALIIGVMNNGLTILGLSSFWQYVAKGAVIVLAVI 326

Query: 315 LSAWRDRRRA 324
           L  WR +  A
Sbjct: 327 LDKWRQKDAA 336