Pairwise Alignments

Query, 319 a.a., Cytochrome c oxidase subunit 2 from Azospirillum sp. SherDot2

Subject, 520 a.a., cytochrome c oxidase, subunit II (RefSeq) from Shewanella amazonensis SB2B

 Score = 94.4 bits (233), Expect = 6e-24
 Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 62/341 (18%)

Query: 21  LFAALLGVSAFILLLVFGLMILFCVRYRKGSKVERGNRLGRTWRVEVAWTGLTFAAFLVL 80
           L   +L +   I ++VFG MI   + +RK SK     +   + +VE+AWT + F   + +
Sbjct: 40  LHMTILYICCAIGVVVFGAMIYAMINHRK-SKGAVAAQFHESTKVEIAWTLVPFLILIAM 98

Query: 81  YFWGANLYVRIHSPPSDATDIYVVGKQWMWKIEH-------------PGGQ--------- 118
                   + +  P +    I + G QW W  ++             P  Q         
Sbjct: 99  AIPATKTLIAMEDPSNADLTIKITGSQWKWHYDYFDHDFGFYSILATPRSQIEGAEAKGD 158

Query: 119 ---REIDT-LHVPVGRPVRLVLTSQDVIHDFAIPAFRIRQDAVPGRYETLWFTPTEVGEY 174
               E+D  L +P  R VR ++TS DVIH + +PAF +++DA PG     W    + G Y
Sbjct: 159 HYLLEVDKHLVLPTNRKVRFLMTSDDVIHSWWVPAFAVKKDANPGFINEAWTRIDKPGIY 218

Query: 175 RLFCAEFCGTWHARMGGTVVVMEPSDFQHWLDSQDPGPS------------------LAQ 216
              CAE CG  H  M   V V+  ++F  W+++Q    S                  L  
Sbjct: 219 HGQCAELCGKDHGFMPIVVEVLPEAEFDTWVENQKQLASNAAAEAAAALNQTLSMEELMV 278

Query: 217 EGEALFRSYGCSGCHGGAGTVHAPKLEGLFGRPVPLEGGRTVIAD-DRYLRDSILMPKAE 275
           +GE ++ +  C+ C       H P   GL G    L+G    +   D++L D ++  K+ 
Sbjct: 279 QGEKVYMA-SCAAC-------HQPNGMGLPGVFPALKGSAIAMGPVDKHL-DIVINGKSG 329

Query: 276 IAAGYPPVMPSFAGQIGEDDLLKLVAYIKSL-ADKTADSAE 315
            A      M +F  Q+   ++  +V Y ++   + T D+ +
Sbjct: 330 TA------MQAFNKQLSATEIAAVVTYERNAWGNNTGDTVQ 364