Pairwise Alignments

Query, 338 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 426 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  160 bits (404), Expect = 7e-44
 Identities = 103/311 (33%), Positives = 155/311 (49%), Gaps = 22/311 (7%)

Query: 20  IAALAVLPFLAGNAYLEHLLVLWMLYALLALSLNIVIGYLGELTFGHAAFVGVGAYTSAI 79
           I    V PF A N Y+  +++L ++Y LL L LNIV+G  G L  G+ AF  +GAY  A+
Sbjct: 104 IVIAIVFPFFA-NKYVLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLAL 162

Query: 80  LSTQLGLPPLLGLPLAGLVAAAFGLVIGYAALRVVGPQFAILTLGFGAILFTITNHWVDL 139
               LGL     LPLA + AA  G ++G+  LR+ G   AI+TLGFG I+  + N+W+  
Sbjct: 163 GYQYLGLGFWTVLPLAAIAAAMAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSF 222

Query: 140 TRGPMGITDIPP----MAIGPLAFDSARPTY----------------YLVLAL-VLATAY 178
           T GP G+    P    +  G  A D   P +                Y+VL + VL   Y
Sbjct: 223 TGGPNGMPVPSPTFLGLEFGRRAKDGGVPFHEFFGIDYNPNIKFLFIYIVLFITVLLVLY 282

Query: 179 LCHALVGSRTGRAFLAVRENAPLAASLGINVFHTKLMGFVAATAIAGIGGAIYAHYIRVI 238
           + H L     GRA+ A+RE+     S+G+N    KL  F    + AG+ G  +A Y   +
Sbjct: 283 VKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFV 342

Query: 239 TPDIMGVHNVAALIIVVIIGGRGTILGPILGALVYIGLLESLRVAGPLRMVIFAALLTGT 298
            P        A ++ +V++GG G+ +G ++ A V     E LR     R+++F  L+   
Sbjct: 343 NPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGVLMVLM 402

Query: 299 VVFLPGGLISL 309
           +++ P GLI +
Sbjct: 403 MIWRPRGLIRI 413