Pairwise Alignments

Query, 338 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 417 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas aeruginosa PA14

 Score =  163 bits (413), Expect = 6e-45
 Identities = 101/320 (31%), Positives = 162/320 (50%), Gaps = 24/320 (7%)

Query: 12  QPLAIAGGIAALAVLPFLAGNAYLEHLLVLWMLYALLALSLNIVIGYLGELTFGHAAFVG 71
           Q  A+   +    V PF A    ++ +  L ++Y +L + LNIV+G  G L  G+  F  
Sbjct: 91  QRWAVLALVVVAFVWPFFASRGAVD-IATLILIYVMLGIGLNIVVGLAGLLDLGYVGFYA 149

Query: 72  VGAYTSAILSTQLGLPPLLGLPLAGLVAAAFGLVIGYAALRVVGPQFAILTLGFGAILFT 131
           VGAYT A+L+   G      LP+AG++AA FG ++G+  LR+ G   AI+TLGFG I+  
Sbjct: 150 VGAYTYALLAEYAGFGFWTALPIAGMMAALFGFLLGFPVLRLRGDYLAIVTLGFGEIIRI 209

Query: 132 ITNHWVDLTRGPMGITDIPPMAIGPLAFDSARP----------------------TYYLV 169
           +  +  ++T GP GI  IP   +  L F+   P                       Y + 
Sbjct: 210 LLRNMTEITGGPNGIGSIPKPTLFGLTFERRAPEGMQTFHEFFGIAYNTNYKVILLYVVA 269

Query: 170 LALVLATAYLCHALVGSRTGRAFLAVRENAPLAASLGINVFHTKLMGFVAATAIAGIGGA 229
           L LVL   ++ + L+    GRA+ A+RE+     +LG+N    KL  F    + AG  G+
Sbjct: 270 LLLVLLALFVINRLMRMPIGRAWEALREDEVACRALGLNPTIVKLSAFTIGASFAGFAGS 329

Query: 230 IYAHYIRVITPDIMGVHNVAALIIVVIIGGRGTILGPILGALVYIGLLESLRVAGPLRMV 289
            +A    ++TP+       A ++ +V++GG G+ LG IL A+V + LL+ +R     RM+
Sbjct: 330 FFAARQGLVTPESFTFIESAMILAIVVLGGMGSQLGVILAAVVMV-LLQEMRGFNEYRML 388

Query: 290 IFAALLTGTVVFLPGGLISL 309
           IF   +   +++ P GL+ +
Sbjct: 389 IFGLTMIVMMIWRPQGLLPM 408