Pairwise Alignments

Query, 827 a.a., DNA gyrase subunit B from Azospirillum sp. SherDot2

Subject, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

 Score =  871 bits (2250), Expect = 0.0
 Identities = 466/818 (56%), Positives = 590/818 (72%), Gaps = 25/818 (3%)

Query: 19  DYGAESITVLRGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGYCDKVEVVL 78
           +Y + SI VL+GLDAVRKRPGMYIGDTDDG+GLHHMV+EVVDN+IDEALAGYC  + V +
Sbjct: 4   NYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIVVTI 63

Query: 79  NADGSVTVRDNGRGIPTDIHSEEGVSAAEVVMTQLHAGGKFNQNSYKVSGGLHGVGVSVV 138
           + D SV+V D+GRGIPT++H EE VSAAEV+MT LHAGGKF+ NSYKVSGGLHGVGVSVV
Sbjct: 64  HEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVV 123

Query: 139 NALSETLDLRIWRGGRTWTMRFRHGNAEAPLADVGEAPMVPEKGKPLSGTEVTFMPSTET 198
           NALSE + L I+RGG+  +  + HG  +APLA VGE           +GT V F PS +T
Sbjct: 124 NALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVGETER--------TGTTVRFWPSAQT 175

Query: 199 FTNIEFDFATLEHRLRELAFLNSGVRLLLTDARGVEPKVQDLHYEGGLEAFVSWLDRSKT 258
           FTNIEF +  L  RLREL+FLNSGV + LTD R  E K     YEGG++AFV+ L+R+KT
Sbjct: 176 FTNIEFHYDILAKRLRELSFLNSGVSIKLTDER-EEDKKDHFMYEGGIQAFVTHLNRNKT 234

Query: 259 ALHKPAITLKNERPTEHGGVVTVECALQWNDSYHETTLCFTNNIPQKDGGTHLAGFRAAL 318
            +H+       ER  E G  ++VE A+QWND + E   CFTNNIPQ+DGGTHLAGFR AL
Sbjct: 235 PIHEKVFHFNQER--EDG--ISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGAL 290

Query: 319 TRAINNYATESGIAKKEKVSLSGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVV 378
           TR +NNY  + G +KK + + SGDDAREGLT V+SVKVPDPKFSSQTKDKLVSSEV+  V
Sbjct: 291 TRTLNNYMDKEGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAV 350

Query: 379 EAVVGEALAQYFEEHPADARRVIQKVVEAAAAREAARKARDIT-RKSSLSMSSLPGKLAD 437
           E+ + E LA +  E+P++A+ V  K+++AA AREAARKAR++T RK +L ++ LPGKLAD
Sbjct: 351 ESAMNEKLADFLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLAD 410

Query: 438 CQERDPALSELFIVEGDSAGGSAKQGRSRQSQAILPLRGKILNVERARLDKMLGSAEIGT 497
           CQE+DPALSEL+IVEGDSAGGSAKQGR+R++QAILPL+GKILNVE+AR DKML S E+ T
Sbjct: 411 CQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVAT 470

Query: 498 LIAALGTGIS-DEFNADKARYHKIIIMTDADVDGSHIRTLLLTFFFRQMPDLIERGYLYI 556
           LI ALG GI  DE+N DK RYH IIIMTDADVDGSHIRTLLLTFF+RQMP+LIERGY+YI
Sbjct: 471 LITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYI 530

Query: 557 AQPPLYRIKRGNAKERYLKDDRALEEYLVEAALGDLSVRL-SDGSLLIGEQLAALVEQAR 615
           AQPPLY++K+G  +E+Y+KD+ A+ +Y V  A+    + + +D   L GE L  LV+Q  
Sbjct: 531 AQPPLYKVKKGK-QEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYN 589

Query: 616 TARPAIDTLSRKVGNAMVVEQAAVAGTLSAALADDKAAAEAAAQTVAERMNGLDADGGWR 675
            A   ++ +SR+   AM+ E   V   ++A L  DKAA EA  Q + E++N  +      
Sbjct: 590 AAIKLVERMSRRYPYAMLHELIYVP-RINAELCADKAAVEAWTQRLVEQLNAKEVGASQY 648

Query: 676 GEALPQGG-----YAVIRAR-RGVTHRHLFDTDLLKSGEARRLDALAADLKRVFGTAGKA 729
              +            I+ R  GVTH +L   DL+ S E  +L  L+  L  +   AG  
Sbjct: 649 SVLVEHNAELNVYLPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDGLI-EAGAF 707

Query: 730 FEKQKESRALTGPVALFDTVMELGRRGVTIQRYKGLGEMNPDQLWETTLDPTKRSLLQVR 789
            ++ +  + ++   A  D +++  RRG++IQRYKGLGEMNPDQLWETT+DP  R ++QV 
Sbjct: 708 IKRGERVQPISSFAAALDWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMQVT 767

Query: 790 VSHVDQAEEVFSTLMGDVVEPRREFIQDNALKVSNLDV 827
           +     A+E+F+TLMGD VEPRR FI+ NALKV+NLDV
Sbjct: 768 IEDAVGADELFTTLMGDQVEPRRAFIETNALKVANLDV 805