Pairwise Alignments

Query, 288 a.a., HTH-type transcriptional activator RhaS from Azospirillum sp. SherDot2

Subject, 285 a.a., AraC-like DNA-binding protein from Paraburkholderia graminis OAS925

 Score =  328 bits (842), Expect = 6e-95
 Identities = 169/282 (59%), Positives = 196/282 (69%), Gaps = 5/282 (1%)

Query: 7   ERTGGQDDWVAVRRDAETGIETIRAHFRGHAYDLHDHDELLVGVTEQGVQAFRCRRRLHT 66
           ERT   D W+  RRD ETGIE +RAHFRGHAYD HDHD++L+G TEQGVQ F+C R LHT
Sbjct: 9   ERT---DHWLVARRDPETGIEGLRAHFRGHAYDPHDHDDMLIGYTEQGVQRFQCHRSLHT 65

Query: 67  SVPGRVILIEPGEAHDGHSPGEDGFTYAMLYLPVPLLTARSEALRSLTPRGTGLPLGFRD 126
           S PGR ILIEPG  HDGH+P   GFTYA LYLP   +   +  L    P   G+   F  
Sbjct: 66  STPGRAILIEPGALHDGHAPEASGFTYAALYLPQGWVEHAARQLN--LPGLRGVEAAFSH 123

Query: 127 TLADDPGLAATIRSAFLALHQREGRLARDLSLDRLAARLVGHLAPPEERRPQRPDRAALL 186
           TL DD  L   IR+AF A++  EGRLARD +LDR+  +L GH+             AAL 
Sbjct: 124 TLVDDQYLVDAIRAAFFAIYHDEGRLARDQALDRVLTQLSGHVLDAPSTNGSAIPLAALR 183

Query: 187 VRDLLHARMAEDVGLDALSAAAGVDRFRLNRGFRAAFGLSPHAYLVRLRLRTARRRLADG 246
           VRDLLH +MA ++GLD L+ AAG+DRFRL R F+ AFG SPHAYLVRLRLR AR+ LA G
Sbjct: 184 VRDLLHEQMAGNIGLDELATAAGIDRFRLTRLFKRAFGTSPHAYLVRLRLRAARQMLASG 243

Query: 247 EAPALVAAEVGFADQSHLGRWFRRAYGLTPAAYRDLCTNVPD 288
             PA VAA VGF+DQSHLGRWF RAY +TPAAYR +CTNVPD
Sbjct: 244 HQPAQVAAAVGFSDQSHLGRWFHRAYRMTPAAYRRMCTNVPD 285