Pairwise Alignments

Query, 234 a.a., Octopine transport system permease protein OccQ from Azospirillum sp. SherDot2

Subject, 229 a.a., histidine ABC transporter permease from Pseudomonas aeruginosa PA14

 Score =  187 bits (474), Expect = 2e-52
 Identities = 98/224 (43%), Positives = 143/224 (63%), Gaps = 1/224 (0%)

Query: 10  NGWGGQLLMGTAMTVAVAVSAFAFGILVGSLGASAKLSHSLALNVVADVYTTIVRGIPEL 69
           +G+G Q+L GT +T+ +A+ +    +L+G LGASAKL+ +  L  +A  YTT++R +P+L
Sbjct: 4   DGFGPQILAGTLVTLKLALGSLLGAVLIGLLGASAKLAANRPLRALASGYTTLIRSVPDL 63

Query: 70  LVIYLLFFGGSGVATSIASAFGYDGRVDLNAFTIGVLAVGLISGAYSTEVIRGAVQSVPF 129
           +++ LLFF    +   +  A G   +VD++ F  G + +  I GAY TE  RGA Q+VP 
Sbjct: 64  VIMLLLFFSLQILLNRVTDALGI-AQVDIDPFAAGCVTLAFIYGAYFTETFRGAFQAVPA 122

Query: 130 GQIEAARACGMSRWLILRRVLVPQTLRFALPGLGNVWQLTLKDTALVSVTALAELMRITH 189
           GQ+EAA+A GM RW + RRVL+PQ LR+ALPG+GN WQ+ +K TALVS+  L +L++ T 
Sbjct: 123 GQVEAAQAYGMGRWRVFRRVLLPQMLRYALPGIGNNWQVLVKSTALVSIIGLGDLVKATQ 182

Query: 190 LAAGATRQPFLFYSTAAVLYLMLTTISTALFNRAEISANRGVRR 233
            A   T Q F F     ++YL +T IS A     E  ++ GVRR
Sbjct: 183 DAGKGTLQFFHFTLVCGLIYLAITAISNAALLWLERRSSLGVRR 226