Pairwise Alignments

Query, 281 a.a., Nopaline-binding periplasmic protein from Azospirillum sp. SherDot2

Subject, 286 a.a., octopine/nopaline transport system substrate-binding protein from Paraburkholderia graminis OAS925

 Score =  222 bits (565), Expect = 8e-63
 Identities = 130/285 (45%), Positives = 172/285 (60%), Gaps = 7/285 (2%)

Query: 1   MKKIVSALAL-GAMMAVAA--AGAAGAKEWKTVRIASEGAYPPWNATDTSGKLTGFEVDL 57
           +K+  +A AL GA+   AA  A  A AK+WKTV IA EG Y PWN T   GKL GFE +L
Sbjct: 3   VKRTTAAKALIGAVFGAAAIFAAPAQAKDWKTVTIALEGGYAPWNLTLPGGKLGGFEPEL 62

Query: 58  GNDLCKRMKVTCEFVAQDWDGIIPALQQGKYDAIMSAMTITDERKKVIDFSVPYGTEPSV 117
             +LC+R+K+ C  VAQDWDG+IP LQ GK+D +M A++IT ER+K+I FS PY   P+ 
Sbjct: 63  VANLCERIKLQCNLVAQDWDGMIPGLQAGKFDVLMDAISITPEREKIIAFSKPYAATPAT 122

Query: 118 FAVVTGSPLAKALNLGADRVDLNDQGKA-KPVLDKLAEALKGKSVGVQVSTIQADFMDKH 176
           FAV     L KA   GA  V L+   KA +P +D L + LKGK++G+Q  T+   F+++ 
Sbjct: 123 FAVADTKVLPKA-PPGAAVVKLSGDAKADQPTVDALRKQLKGKTIGIQSGTVYTKFINEG 181

Query: 177 LPKV-TMRTYDKIDNAGIDLGSGRVDAMLGDRSVVEA-VVKATPDKMVIVGPNFIGGVIG 234
              + T+R Y       +DL +GR+DA   D +   A V K     + + GP   G + G
Sbjct: 182 FKDIATIRVYKTSPERDLDLANGRIDASFDDVTYYAANVDKKETASISMAGPKIGGPIWG 241

Query: 235 EGMGVGLRKDTADLKAMFDKAIGEALKDGTVKKLSTQHFGYDISP 279
            G G+  RK  ADLKA FD AI  AL DGTVKKLS + F  D++P
Sbjct: 242 PGEGLAFRKQDADLKAKFDTAISAALADGTVKKLSAKWFKTDVTP 286