Pairwise Alignments

Query, 597 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 844 a.a., PAS domain S-box protein from Synechocystis sp000284455 PCC 6803

 Score =  112 bits (281), Expect = 5e-29
 Identities = 80/236 (33%), Positives = 121/236 (51%), Gaps = 27/236 (11%)

Query: 341 QRELERRVRDRTASLERTIGERDAVLAQKDLLMREANHRIKNSLQVVSSLLSLQGQAVGD 400
           Q  L  + +   AS  +   +    L QK +L++E +HR+KN+LQ++SSLL LQ      
Sbjct: 621 QATLYEQAQQELASKNQLFVQLTNELEQKKVLLKEIHHRVKNNLQIMSSLLYLQFSKASP 680

Query: 401 A--QLSEHLLEAGRRVQAIADIHRLLYRVDDVHFIPFHDYLTELCRDLERSARSEGGNWR 458
           A  QLSE   E   R+Q++A IH  LYR +D+  I F  YL  L  ++ +S      + +
Sbjct: 681 AIQQLSE---EYQNRIQSMALIHEQLYRSEDLANIDFSQYLKNLTHNICQSYGCNTDSIK 737

Query: 459 LELVVEPVEVPTDHAVQLGLLANELVMNAIKHAYRPLASTMVGVAAGSQAGAPDRASEDT 518
           ++L+VE V+VP + ++ LGL+  ELV NA+KHA+                  P    E  
Sbjct: 738 IKLLVEQVKVPLEQSIPLGLIIQELVSNALKHAF------------------PTTEGE-- 777

Query: 519 NVIVVGLRRDGETVQMIVGDRGVGLPPDFDWRRSRSLGMRLIHTLSKQLDAILSIE 574
             I +          + V D GVG+  D D   + SLGM+LI++L++QL   L  E
Sbjct: 778 --ISIKFTSMNSHYSLQVWDNGVGISRDIDLENTDSLGMQLIYSLTEQLQGELHYE 831