Pairwise Alignments

Query, 296 a.a., HTH-type transcriptional regulator HdfR from Azospirillum sp. SherDot2

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  145 bits (367), Expect = 8e-40
 Identities = 97/294 (32%), Positives = 157/294 (53%), Gaps = 14/294 (4%)

Query: 3   WDKLRVFHAVAEAGSFTHAGETLNLSQSAVSRQISALEESLGVPLFHRHARGLILTEQGE 62
           WD +  F AVAEA +FT A + LN+S + VSRQI ALE  LG  LF+R  R + LTE+G 
Sbjct: 4   WDGISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGT 63

Query: 63  LLHRTARDVFAKLSMTEAMLTESREHPKGPLRVTTTVAFGSTWLTPRINEFMSIYPDIQL 122
           + +R  R +   L   E  +T+ ++ P+G +++T  VA+G  ++ P +N+FM  YP ++ 
Sbjct: 64  IYYRHCRQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVEC 123

Query: 123 TLLIDDDELDLAMREADIAIRMNTPRQPDLIQRHLMSIRFHLYASQSYLKKKGSPKTLAE 182
            + + +  LDL     D+AIR+       L+ + L S   ++ AS SY++K G P TL+E
Sbjct: 124 NVDLTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSE 183

Query: 183 LDNHDLITYPPDVRAPIPNVNW--IMEMG-DPSPNRKPILQVNSVYAIYRAVESGLGIGA 239
           L+ H+ +         I N N+   +E G + +   +  L  NS YA+  A   G+GI  
Sbjct: 184 LNQHNCL---------IGNHNYWRFIEHGRERNFKVRGKLICNSGYALRDAALKGIGIVQ 234

Query: 240 LPDFLV--DSFSKDVTRILPDVDGPKVDAYFVYAEELRHSKRIAVFRDFLVKKV 291
           LPD+ +  D  +  +   L      K   + +Y +    S ++ V  D+L +K+
Sbjct: 235 LPDYYIEEDIHAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEKL 288