Pairwise Alignments

Query, 275 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

Subject, 274 a.a., ABC transporter permease from Castellaniella sp019104865 MT123

 Score =  124 bits (312), Expect = 2e-33
 Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 2/265 (0%)

Query: 1   MTAARFRRLLTGAYLMLFFGYLFLPLGIMAAATFNSSRFPTVTPWMGFTLGWFQALWEDQ 60
           M   R+  L    Y    F ++F P+      +FN+ RFPT+ P   F+  W++ +  D 
Sbjct: 1   MNENRWINLTLYCYAFGIFVFIFTPIAASFVFSFNADRFPTL-PLGDFSFQWYRDIISDA 59

Query: 61  RMWAALGTSLLVGAGVIALAVPLGLAAALLLDRLHSRAKTVLYALMVSPLLTPGVIVGIS 120
            +W A G S  VG  V  ++  LG  AA    R     K+V   L + P   P VI+G++
Sbjct: 60  DIWLAFGNSAKVGFTVAVVSTVLGFCAAYTDHRYRFFGKSVYLTLALLPPTIPVVIMGLA 119

Query: 121 TLVFWREWFGVSGGLFLTVVAQSSFIAAYAMLLFSARLERFDPALEEAALDLGATHGQVF 180
            L F      +SG +   +++     A +AM +   RL      +E AA +LGA+  +  
Sbjct: 120 MLAFLSR-VSLSGNIQAVMISHIVMCAPFAMAVIRMRLALMPADMEAAAWNLGASQWRAL 178

Query: 181 RRITLPYLMPAILSAALLAFLQSFENYNTTLFVRGLDTTLTVYIATKVRTGLTPAVNALS 240
             + LP+ +P+I +A  +    SF+ Y    FV GLD T+ V I T ++  ++P +NA+ 
Sbjct: 179 WHVILPFSLPSIGAALFVTMAVSFDEYAVAWFVSGLDPTVPVSILTTLQGRVSPTINAIG 238

Query: 241 LVLIALTVLGAVVYEILRRREARRQ 265
            ++  +T++  V+ +IL  R  + +
Sbjct: 239 SIVFTVTIMLVVLAQILLLRHGKNK 263